Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HMGCS1Q01581 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HMGCS1Q01581 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HMGCS1Q01581 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HMGCS1Q01581 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.38■□□□□ 0.53
HMGCS1Q01581 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.38■□□□□ 0.53
HMGCS1Q01581 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.38■□□□□ 0.53
HMGCS1Q01581 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HMGCS1Q01581 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HMGCS1Q01581 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC18.38■□□□□ 0.53
HMGCS1Q01581 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.38■□□□□ 0.53
HMGCS1Q01581 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.38■□□□□ 0.53
HMGCS1Q01581 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.38■□□□□ 0.53
HMGCS1Q01581 AC004264.1-201ENST00000608354 794 ntBASIC18.38■□□□□ 0.53
HMGCS1Q01581 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.38■□□□□ 0.53
HMGCS1Q01581 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.38■□□□□ 0.53
HMGCS1Q01581 AL023875.1-201ENST00000640777 796 ntBASIC18.38■□□□□ 0.53
HMGCS1Q01581 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HMGCS1Q01581 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
HMGCS1Q01581 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
HMGCS1Q01581 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
HMGCS1Q01581 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
HMGCS1Q01581 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
HMGCS1Q01581 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HMGCS1Q01581 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.38■□□□□ 0.53
HMGCS1Q01581 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HMGCS1Q01581 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
HMGCS1Q01581 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HMGCS1Q01581 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
HMGCS1Q01581 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HMGCS1Q01581 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.38■□□□□ 0.53
HMGCS1Q01581 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HMGCS1Q01581 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HMGCS1Q01581 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.37■□□□□ 0.53
HMGCS1Q01581 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HMGCS1Q01581 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HMGCS1Q01581 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HMGCS1Q01581 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
HMGCS1Q01581 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
HMGCS1Q01581 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
HMGCS1Q01581 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HMGCS1Q01581 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HMGCS1Q01581 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HMGCS1Q01581 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HMGCS1Q01581 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
HMGCS1Q01581 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
HMGCS1Q01581 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.37■□□□□ 0.53
HMGCS1Q01581 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.37■□□□□ 0.53
HMGCS1Q01581 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.37■□□□□ 0.53
HMGCS1Q01581 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
HMGCS1Q01581 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HMGCS1Q01581 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.37■□□□□ 0.53
HMGCS1Q01581 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.37■□□□□ 0.53
HMGCS1Q01581 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.37■□□□□ 0.53
HMGCS1Q01581 AL160286.2-201ENST00000567150 934 ntBASIC18.37■□□□□ 0.53
HMGCS1Q01581 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.37■□□□□ 0.53
HMGCS1Q01581 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HMGCS1Q01581 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.37■□□□□ 0.53
HMGCS1Q01581 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
HMGCS1Q01581 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC18.37■□□□□ 0.53
HMGCS1Q01581 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
HMGCS1Q01581 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC18.37■□□□□ 0.53
HMGCS1Q01581 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.37■□□□□ 0.53
HMGCS1Q01581 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HMGCS1Q01581 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
HMGCS1Q01581 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.37■□□□□ 0.53
HMGCS1Q01581 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HMGCS1Q01581 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.36■□□□□ 0.53
HMGCS1Q01581 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HMGCS1Q01581 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
HMGCS1Q01581 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HMGCS1Q01581 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HMGCS1Q01581 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
HMGCS1Q01581 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
HMGCS1Q01581 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HMGCS1Q01581 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HMGCS1Q01581 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.36■□□□□ 0.53
HMGCS1Q01581 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.36■□□□□ 0.53
HMGCS1Q01581 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HMGCS1Q01581 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.36■□□□□ 0.53
HMGCS1Q01581 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
HMGCS1Q01581 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.36■□□□□ 0.53
HMGCS1Q01581 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HMGCS1Q01581 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.36■□□□□ 0.53
HMGCS1Q01581 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC18.36■□□□□ 0.53
HMGCS1Q01581 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.36■□□□□ 0.53
HMGCS1Q01581 AL031598.1-201ENST00000561511 1773 ntBASIC18.36■□□□□ 0.53
HMGCS1Q01581 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.36■□□□□ 0.53
HMGCS1Q01581 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.36■□□□□ 0.53
HMGCS1Q01581 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.36■□□□□ 0.53
HMGCS1Q01581 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HMGCS1Q01581 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HMGCS1Q01581 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.36■□□□□ 0.53
HMGCS1Q01581 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.36■□□□□ 0.53
HMGCS1Q01581 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HMGCS1Q01581 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HMGCS1Q01581 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
HMGCS1Q01581 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
HMGCS1Q01581 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
HMGCS1Q01581 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms