Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.11■□□□□ 0.33
VBP1P61758 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VBP1P61758 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
VBP1P61758 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
VBP1P61758 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.11■□□□□ 0.33
VBP1P61758 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
VBP1P61758 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.11■□□□□ 0.33
VBP1P61758 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VBP1P61758 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
VBP1P61758 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
VBP1P61758 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
VBP1P61758 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
VBP1P61758 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
VBP1P61758 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
VBP1P61758 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
VBP1P61758 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC17.11■□□□□ 0.33
VBP1P61758 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC17.11■□□□□ 0.33
VBP1P61758 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC17.11■□□□□ 0.33
VBP1P61758 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
VBP1P61758 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC17.11■□□□□ 0.33
VBP1P61758 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC17.11■□□□□ 0.33
VBP1P61758 AC008764.7-201ENST00000593779 1081 ntBASIC17.11■□□□□ 0.33
VBP1P61758 MPST-208ENST00000628507 698 ntTSL 5 BASIC17.11■□□□□ 0.33
VBP1P61758 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VBP1P61758 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
VBP1P61758 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
VBP1P61758 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.11■□□□□ 0.33
VBP1P61758 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC17.11■□□□□ 0.33
VBP1P61758 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VBP1P61758 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
VBP1P61758 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
VBP1P61758 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
VBP1P61758 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.11■□□□□ 0.33
VBP1P61758 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC17.11■□□□□ 0.33
VBP1P61758 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VBP1P61758 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.11■□□□□ 0.33
VBP1P61758 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
VBP1P61758 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VBP1P61758 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
VBP1P61758 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.1■□□□□ 0.33
VBP1P61758 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.1■□□□□ 0.33
VBP1P61758 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
VBP1P61758 ZNF815P-204ENST00000434898 1737 ntBASIC17.1■□□□□ 0.33
VBP1P61758 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VBP1P61758 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
VBP1P61758 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VBP1P61758 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VBP1P61758 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC17.1■□□□□ 0.33
VBP1P61758 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC17.1■□□□□ 0.33
VBP1P61758 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC17.1■□□□□ 0.33
VBP1P61758 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VBP1P61758 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
VBP1P61758 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
VBP1P61758 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
VBP1P61758 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VBP1P61758 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC17.1■□□□□ 0.33
VBP1P61758 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
VBP1P61758 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.1■□□□□ 0.33
VBP1P61758 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
VBP1P61758 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VBP1P61758 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VBP1P61758 SIRPAP1-201ENST00000448467 1770 ntBASIC17.1■□□□□ 0.33
VBP1P61758 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
VBP1P61758 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VBP1P61758 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
VBP1P61758 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
VBP1P61758 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
VBP1P61758 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
VBP1P61758 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.09■□□□□ 0.33
VBP1P61758 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VBP1P61758 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.09■□□□□ 0.33
VBP1P61758 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
VBP1P61758 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VBP1P61758 VMO1-204ENST00000441199 741 ntTSL 2 BASIC17.09■□□□□ 0.33
VBP1P61758 CD44-222ENST00000526025 1052 ntTSL 2 BASIC17.09■□□□□ 0.33
VBP1P61758 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC17.09■□□□□ 0.33
VBP1P61758 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC17.09■□□□□ 0.33
VBP1P61758 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
VBP1P61758 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VBP1P61758 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC17.09■□□□□ 0.33
VBP1P61758 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.09■□□□□ 0.33
VBP1P61758 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
VBP1P61758 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.09■□□□□ 0.33
VBP1P61758 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
VBP1P61758 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
VBP1P61758 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
VBP1P61758 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
VBP1P61758 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VBP1P61758 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VBP1P61758 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VBP1P61758 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
VBP1P61758 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.33
VBP1P61758 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
VBP1P61758 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.08■□□□□ 0.33
VBP1P61758 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
VBP1P61758 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
VBP1P61758 AC080080.1-201ENST00000625121 2420 ntBASIC17.08■□□□□ 0.33
VBP1P61758 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
VBP1P61758 GNAS-203ENST00000306120 1878 ntBASIC17.08■□□□□ 0.33
VBP1P61758 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms