Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLDN20P56880 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLDN20P56880 KRT16P1-201ENST00000399124 1418 ntBASIC17.49■□□□□ 0.39
CLDN20P56880 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.49■□□□□ 0.39
CLDN20P56880 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLDN20P56880 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLDN20P56880 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLDN20P56880 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
CLDN20P56880 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLDN20P56880 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.49■□□□□ 0.39
CLDN20P56880 AC026471.5-201ENST00000615068 467 ntBASIC17.49■□□□□ 0.39
CLDN20P56880 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.49■□□□□ 0.39
CLDN20P56880 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLDN20P56880 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
CLDN20P56880 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLDN20P56880 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLDN20P56880 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.49■□□□□ 0.39
CLDN20P56880 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.49■□□□□ 0.39
CLDN20P56880 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CLDN20P56880 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLDN20P56880 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLDN20P56880 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CLDN20P56880 AC005332.8-201ENST00000622750 2735 ntBASIC17.48■□□□□ 0.39
CLDN20P56880 AL049812.1-201ENST00000432563 2267 ntBASIC17.48■□□□□ 0.39
CLDN20P56880 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLDN20P56880 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
CLDN20P56880 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.48■□□□□ 0.39
CLDN20P56880 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.48■□□□□ 0.39
CLDN20P56880 MIR4785-201ENST00000585005 73 ntBASIC17.48■□□□□ 0.39
CLDN20P56880 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.48■□□□□ 0.39
CLDN20P56880 AL445675.2-201ENST00000620291 557 ntBASIC17.48■□□□□ 0.39
CLDN20P56880 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLDN20P56880 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CLDN20P56880 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.48■□□□□ 0.39
CLDN20P56880 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLDN20P56880 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.48■□□□□ 0.39
CLDN20P56880 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLDN20P56880 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CLDN20P56880 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLDN20P56880 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.47■□□□□ 0.39
CLDN20P56880 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
CLDN20P56880 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLDN20P56880 LINC01465-201ENST00000408887 1940 ntBASIC17.47■□□□□ 0.39
CLDN20P56880 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CLDN20P56880 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CLDN20P56880 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLDN20P56880 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CLDN20P56880 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CLDN20P56880 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLDN20P56880 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CLDN20P56880 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.47■□□□□ 0.39
CLDN20P56880 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
CLDN20P56880 AL355355.2-201ENST00000442321 338 ntBASIC17.47■□□□□ 0.39
CLDN20P56880 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.47■□□□□ 0.39
CLDN20P56880 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.47■□□□□ 0.39
CLDN20P56880 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.47■□□□□ 0.39
CLDN20P56880 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.47■□□□□ 0.39
CLDN20P56880 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLDN20P56880 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLDN20P56880 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CLDN20P56880 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CLDN20P56880 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CLDN20P56880 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLDN20P56880 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.47■□□□□ 0.39
CLDN20P56880 KRT17P2-201ENST00000300992 1314 ntBASIC17.47■□□□□ 0.39
CLDN20P56880 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLDN20P56880 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.46■□□□□ 0.39
CLDN20P56880 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLDN20P56880 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.46■□□□□ 0.39
CLDN20P56880 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLDN20P56880 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLDN20P56880 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CLDN20P56880 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLDN20P56880 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLDN20P56880 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CLDN20P56880 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CLDN20P56880 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC17.46■□□□□ 0.39
CLDN20P56880 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.46■□□□□ 0.39
CLDN20P56880 AP003071.4-201ENST00000562276 1284 ntBASIC17.46■□□□□ 0.39
CLDN20P56880 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.46■□□□□ 0.39
CLDN20P56880 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.46■□□□□ 0.39
CLDN20P56880 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.46■□□□□ 0.39
CLDN20P56880 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLDN20P56880 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLDN20P56880 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.46■□□□□ 0.39
CLDN20P56880 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CLDN20P56880 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
CLDN20P56880 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.45■□□□□ 0.38
CLDN20P56880 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN20P56880 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN20P56880 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
CLDN20P56880 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN20P56880 AL138781.2-201ENST00000617896 1843 ntBASIC17.45■□□□□ 0.38
CLDN20P56880 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN20P56880 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN20P56880 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN20P56880 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.45■□□□□ 0.38
CLDN20P56880 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN20P56880 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN20P56880 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms