Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PMS1P54277 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PMS1P54277 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC21■□□□□ 0.95
PMS1P54277 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PMS1P54277 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC21■□□□□ 0.95
PMS1P54277 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC21■□□□□ 0.95
PMS1P54277 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC21■□□□□ 0.95
PMS1P54277 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC21■□□□□ 0.95
PMS1P54277 TSPY21P-201ENST00000433481 731 ntBASIC21■□□□□ 0.95
PMS1P54277 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC21■□□□□ 0.95
PMS1P54277 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC21■□□□□ 0.95
PMS1P54277 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC21■□□□□ 0.95
PMS1P54277 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
PMS1P54277 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
PMS1P54277 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC21■□□□□ 0.95
PMS1P54277 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC21■□□□□ 0.95
PMS1P54277 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC21■□□□□ 0.95
PMS1P54277 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC21■□□□□ 0.95
PMS1P54277 AC110285.5-201ENST00000611501 352 ntBASIC21■□□□□ 0.95
PMS1P54277 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC21■□□□□ 0.95
PMS1P54277 WIZP1-201ENST00000531444 2299 ntBASIC21■□□□□ 0.95
PMS1P54277 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PMS1P54277 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PMS1P54277 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC21■□□□□ 0.95
PMS1P54277 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC21■□□□□ 0.95
PMS1P54277 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
PMS1P54277 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
PMS1P54277 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC20.99■□□□□ 0.95
PMS1P54277 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PMS1P54277 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
PMS1P54277 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
PMS1P54277 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PMS1P54277 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC20.99■□□□□ 0.95
PMS1P54277 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC20.99■□□□□ 0.95
PMS1P54277 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC20.99■□□□□ 0.95
PMS1P54277 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PMS1P54277 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PMS1P54277 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PMS1P54277 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC20.99■□□□□ 0.95
PMS1P54277 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PMS1P54277 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PMS1P54277 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PMS1P54277 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
PMS1P54277 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC20.98■□□□□ 0.95
PMS1P54277 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PMS1P54277 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PMS1P54277 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PMS1P54277 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PMS1P54277 Z98044.1-201ENST00000632503 1764 ntBASIC20.98■□□□□ 0.95
PMS1P54277 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PMS1P54277 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
PMS1P54277 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PMS1P54277 POU5F1P3-201ENST00000428824 1078 ntBASIC20.98■□□□□ 0.95
PMS1P54277 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC20.98■□□□□ 0.95
PMS1P54277 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC20.98■□□□□ 0.95
PMS1P54277 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PMS1P54277 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PMS1P54277 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PMS1P54277 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
PMS1P54277 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
PMS1P54277 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC20.98■□□□□ 0.95
PMS1P54277 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC20.97■□□□□ 0.95
PMS1P54277 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC20.97■□□□□ 0.95
PMS1P54277 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PMS1P54277 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
PMS1P54277 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
PMS1P54277 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PMS1P54277 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
PMS1P54277 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC20.97■□□□□ 0.95
PMS1P54277 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
PMS1P54277 TK2-204ENST00000525974 1178 ntTSL 2 BASIC20.97■□□□□ 0.95
PMS1P54277 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.97■□□□□ 0.95
PMS1P54277 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PMS1P54277 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PMS1P54277 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PMS1P54277 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC20.97■□□□□ 0.95
PMS1P54277 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PMS1P54277 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PMS1P54277 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
PMS1P54277 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
PMS1P54277 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PMS1P54277 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PMS1P54277 ADK-206ENST00000541550 2222 ntTSL 2 BASIC20.96■□□□□ 0.95
PMS1P54277 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PMS1P54277 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
PMS1P54277 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC20.96■□□□□ 0.95
PMS1P54277 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PMS1P54277 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC20.96■□□□□ 0.95
PMS1P54277 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20.96■□□□□ 0.95
PMS1P54277 AC004980.1-204ENST00000429707 299 ntBASIC20.96■□□□□ 0.95
PMS1P54277 RPS2P4-201ENST00000476944 856 ntBASIC20.96■□□□□ 0.95
PMS1P54277 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC20.96■□□□□ 0.95
PMS1P54277 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC20.96■□□□□ 0.95
PMS1P54277 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.96■□□□□ 0.95
PMS1P54277 AL445675.2-201ENST00000620291 557 ntBASIC20.96■□□□□ 0.95
PMS1P54277 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC20.96■□□□□ 0.95
PMS1P54277 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC20.96■□□□□ 0.95
PMS1P54277 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
PMS1P54277 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC20.96■□□□□ 0.95
PMS1P54277 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms