Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
CLTCL1P53675 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC27.34■■□□□ 1.97
CLTCL1P53675 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC27.34■■□□□ 1.97
CLTCL1P53675 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
CLTCL1P53675 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC27.34■■□□□ 1.97
CLTCL1P53675 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC27.34■■□□□ 1.97
CLTCL1P53675 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
CLTCL1P53675 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC27.33■■□□□ 1.97
CLTCL1P53675 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC27.33■■□□□ 1.97
CLTCL1P53675 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
CLTCL1P53675 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC27.33■■□□□ 1.97
CLTCL1P53675 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
CLTCL1P53675 CLDN5-201ENST00000403084 2357 ntBASIC27.33■■□□□ 1.97
CLTCL1P53675 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
CLTCL1P53675 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC27.33■■□□□ 1.97
CLTCL1P53675 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
CLTCL1P53675 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC27.33■■□□□ 1.97
CLTCL1P53675 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC27.33■■□□□ 1.97
CLTCL1P53675 MIR3180-1-201ENST00000580374 94 ntBASIC27.33■■□□□ 1.97
CLTCL1P53675 MIR3180-3-201ENST00000584616 94 ntBASIC27.33■■□□□ 1.97
CLTCL1P53675 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC27.33■■□□□ 1.97
CLTCL1P53675 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC27.33■■□□□ 1.97
CLTCL1P53675 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC27.32■■□□□ 1.96
CLTCL1P53675 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
CLTCL1P53675 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC27.32■■□□□ 1.96
CLTCL1P53675 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
CLTCL1P53675 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC27.32■■□□□ 1.96
CLTCL1P53675 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC27.32■■□□□ 1.96
CLTCL1P53675 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC27.32■■□□□ 1.96
CLTCL1P53675 HLA-F-220ENST00000434407 884 ntBASIC27.32■■□□□ 1.96
CLTCL1P53675 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
CLTCL1P53675 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC27.32■■□□□ 1.96
CLTCL1P53675 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC27.32■■□□□ 1.96
CLTCL1P53675 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC27.32■■□□□ 1.96
CLTCL1P53675 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC27.31■■□□□ 1.96
CLTCL1P53675 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
CLTCL1P53675 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
CLTCL1P53675 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC27.31■■□□□ 1.96
CLTCL1P53675 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC27.31■■□□□ 1.96
CLTCL1P53675 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
CLTCL1P53675 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
CLTCL1P53675 LINC01521-201ENST00000504184 1943 ntBASIC27.31■■□□□ 1.96
CLTCL1P53675 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
CLTCL1P53675 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
CLTCL1P53675 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
CLTCL1P53675 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
CLTCL1P53675 ENSA-205ENST00000361532 792 ntTSL 2 BASIC27.3■■□□□ 1.96
CLTCL1P53675 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
CLTCL1P53675 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
CLTCL1P53675 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC27.3■■□□□ 1.96
CLTCL1P53675 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
CLTCL1P53675 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
CLTCL1P53675 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC27.3■■□□□ 1.96
CLTCL1P53675 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
CLTCL1P53675 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
CLTCL1P53675 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC27.3■■□□□ 1.96
CLTCL1P53675 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
CLTCL1P53675 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC27.3■■□□□ 1.96
CLTCL1P53675 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC27.3■■□□□ 1.96
CLTCL1P53675 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC27.3■■□□□ 1.96
CLTCL1P53675 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC27.3■■□□□ 1.96
CLTCL1P53675 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC27.3■■□□□ 1.96
CLTCL1P53675 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
CLTCL1P53675 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
CLTCL1P53675 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC27.3■■□□□ 1.96
CLTCL1P53675 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC27.3■■□□□ 1.96
CLTCL1P53675 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC27.3■■□□□ 1.96
CLTCL1P53675 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC27.3■■□□□ 1.96
CLTCL1P53675 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC27.3■■□□□ 1.96
CLTCL1P53675 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC27.29■■□□□ 1.96
CLTCL1P53675 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC27.29■■□□□ 1.96
CLTCL1P53675 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
CLTCL1P53675 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC27.29■■□□□ 1.96
CLTCL1P53675 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC27.29■■□□□ 1.96
CLTCL1P53675 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
CLTCL1P53675 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
CLTCL1P53675 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
CLTCL1P53675 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC27.29■■□□□ 1.96
CLTCL1P53675 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
CLTCL1P53675 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC27.29■■□□□ 1.96
CLTCL1P53675 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
CLTCL1P53675 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC27.29■■□□□ 1.96
CLTCL1P53675 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC27.29■■□□□ 1.96
CLTCL1P53675 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC27.29■■□□□ 1.96
CLTCL1P53675 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
CLTCL1P53675 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
CLTCL1P53675 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC27.29■■□□□ 1.96
CLTCL1P53675 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
CLTCL1P53675 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC27.28■■□□□ 1.96
CLTCL1P53675 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC27.28■■□□□ 1.96
CLTCL1P53675 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
CLTCL1P53675 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
CLTCL1P53675 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
CLTCL1P53675 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
CLTCL1P53675 GAD2-202ENST00000376248 680 ntTSL 5 BASIC27.28■■□□□ 1.96
CLTCL1P53675 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC27.28■■□□□ 1.96
CLTCL1P53675 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC27.28■■□□□ 1.96
CLTCL1P53675 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC27.28■■□□□ 1.96
CLTCL1P53675 AC092119.3-201ENST00000612618 583 ntBASIC27.28■■□□□ 1.96
CLTCL1P53675 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC27.28■■□□□ 1.96
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms