Protein–RNA interactions for Protein: P47992

XCL1, Lymphotactin, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XCL1P47992 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
XCL1P47992 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC13.12□□□□□ -0.31
XCL1P47992 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
XCL1P47992 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
XCL1P47992 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
XCL1P47992 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
XCL1P47992 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
XCL1P47992 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
XCL1P47992 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC13.12□□□□□ -0.31
XCL1P47992 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
XCL1P47992 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
XCL1P47992 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
XCL1P47992 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
XCL1P47992 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
XCL1P47992 AL049812.1-201ENST00000432563 2267 ntBASIC13.11□□□□□ -0.31
XCL1P47992 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC13.11□□□□□ -0.31
XCL1P47992 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
XCL1P47992 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
XCL1P47992 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC13.11□□□□□ -0.31
XCL1P47992 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
XCL1P47992 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
XCL1P47992 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
XCL1P47992 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC13.11□□□□□ -0.31
XCL1P47992 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
XCL1P47992 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC13.11□□□□□ -0.31
XCL1P47992 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC13.11□□□□□ -0.31
XCL1P47992 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
XCL1P47992 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
XCL1P47992 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC13.11□□□□□ -0.31
XCL1P47992 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
XCL1P47992 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
XCL1P47992 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
XCL1P47992 AC073210.2-201ENST00000430369 194 ntBASIC13.11□□□□□ -0.31
XCL1P47992 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
XCL1P47992 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC13.11□□□□□ -0.31
XCL1P47992 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC13.11□□□□□ -0.31
XCL1P47992 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
XCL1P47992 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
XCL1P47992 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC13.11□□□□□ -0.31
XCL1P47992 AP006587.1-201ENST00000534129 1502 ntBASIC13.11□□□□□ -0.31
XCL1P47992 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
XCL1P47992 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
XCL1P47992 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
XCL1P47992 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC13.11□□□□□ -0.31
XCL1P47992 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC13.11□□□□□ -0.31
XCL1P47992 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
XCL1P47992 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
XCL1P47992 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
XCL1P47992 AC141586.3-201ENST00000562166 1838 ntBASIC13.11□□□□□ -0.31
XCL1P47992 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC13.11□□□□□ -0.31
XCL1P47992 AC092368.3-202ENST00000574180 1591 ntBASIC13.11□□□□□ -0.31
XCL1P47992 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
XCL1P47992 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
XCL1P47992 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
XCL1P47992 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
XCL1P47992 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
XCL1P47992 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC13.1□□□□□ -0.31
XCL1P47992 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
XCL1P47992 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
XCL1P47992 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
XCL1P47992 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
XCL1P47992 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
XCL1P47992 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
XCL1P47992 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
XCL1P47992 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC13.1□□□□□ -0.31
XCL1P47992 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
XCL1P47992 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
XCL1P47992 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
XCL1P47992 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
XCL1P47992 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
XCL1P47992 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC13.1□□□□□ -0.31
XCL1P47992 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC13.1□□□□□ -0.31
XCL1P47992 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC13.1□□□□□ -0.31
XCL1P47992 BET1L-207ENST00000529614 560 ntTSL 5 BASIC13.1□□□□□ -0.31
XCL1P47992 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
XCL1P47992 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC13.1□□□□□ -0.31
XCL1P47992 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC13.1□□□□□ -0.31
XCL1P47992 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
XCL1P47992 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
XCL1P47992 WT1-AS_3.1-201ENST00000613262 234 ntBASIC13.1□□□□□ -0.31
XCL1P47992 AC092118.2-201ENST00000613495 667 ntBASIC13.1□□□□□ -0.31
XCL1P47992 AL121906.2-201ENST00000621597 723 ntBASIC13.1□□□□□ -0.31
XCL1P47992 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC13.1□□□□□ -0.31
XCL1P47992 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC13.1□□□□□ -0.31
XCL1P47992 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
XCL1P47992 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
XCL1P47992 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC13.1□□□□□ -0.31
XCL1P47992 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
XCL1P47992 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
XCL1P47992 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
XCL1P47992 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC13.1□□□□□ -0.31
XCL1P47992 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
XCL1P47992 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
XCL1P47992 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
XCL1P47992 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
XCL1P47992 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
XCL1P47992 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
XCL1P47992 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
XCL1P47992 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
XCL1P47992 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms