Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
MMP13P45452 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
MMP13P45452 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.83■□□□□ 0.77
MMP13P45452 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
MMP13P45452 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.77
MMP13P45452 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
MMP13P45452 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
MMP13P45452 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
MMP13P45452 AL161938.1-201ENST00000569833 2180 ntBASIC19.83■□□□□ 0.77
MMP13P45452 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.83■□□□□ 0.77
MMP13P45452 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
MMP13P45452 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
MMP13P45452 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
MMP13P45452 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
MMP13P45452 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.83■□□□□ 0.77
MMP13P45452 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.83■□□□□ 0.77
MMP13P45452 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.83■□□□□ 0.77
MMP13P45452 TMEM191A-211ENST00000637163 1067 ntBASIC19.83■□□□□ 0.77
MMP13P45452 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
MMP13P45452 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.83■□□□□ 0.76
MMP13P45452 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.83■□□□□ 0.76
MMP13P45452 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
MMP13P45452 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.83■□□□□ 0.76
MMP13P45452 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
MMP13P45452 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
MMP13P45452 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.83■□□□□ 0.76
MMP13P45452 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.82■□□□□ 0.76
MMP13P45452 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
MMP13P45452 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
MMP13P45452 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
MMP13P45452 AC006333.2-201ENST00000607957 2099 ntBASIC19.82■□□□□ 0.76
MMP13P45452 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MMP13P45452 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MMP13P45452 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.82■□□□□ 0.76
MMP13P45452 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
MMP13P45452 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
MMP13P45452 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.82■□□□□ 0.76
MMP13P45452 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.82■□□□□ 0.76
MMP13P45452 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.82■□□□□ 0.76
MMP13P45452 GCSHP5-201ENST00000443090 522 ntBASIC19.82■□□□□ 0.76
MMP13P45452 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
MMP13P45452 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
MMP13P45452 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.82■□□□□ 0.76
MMP13P45452 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MMP13P45452 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MMP13P45452 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
MMP13P45452 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
MMP13P45452 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
MMP13P45452 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC19.82■□□□□ 0.76
MMP13P45452 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
MMP13P45452 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
MMP13P45452 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
MMP13P45452 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.81■□□□□ 0.76
MMP13P45452 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MMP13P45452 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MMP13P45452 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MMP13P45452 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MMP13P45452 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
MMP13P45452 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC19.81■□□□□ 0.76
MMP13P45452 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MMP13P45452 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
MMP13P45452 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
MMP13P45452 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.81■□□□□ 0.76
MMP13P45452 AL158047.1-201ENST00000445918 881 ntBASIC19.81■□□□□ 0.76
MMP13P45452 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.81■□□□□ 0.76
MMP13P45452 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC19.81■□□□□ 0.76
MMP13P45452 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.81■□□□□ 0.76
MMP13P45452 C1QL1P1-201ENST00000568105 661 ntBASIC19.81■□□□□ 0.76
MMP13P45452 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.81■□□□□ 0.76
MMP13P45452 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
MMP13P45452 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.81■□□□□ 0.76
MMP13P45452 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.81■□□□□ 0.76
MMP13P45452 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
MMP13P45452 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MMP13P45452 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MMP13P45452 AIRN-201ENST00000601203 4374 ntBASIC19.81■□□□□ 0.76
MMP13P45452 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
MMP13P45452 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
MMP13P45452 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
MMP13P45452 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
MMP13P45452 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
MMP13P45452 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.8■□□□□ 0.76
MMP13P45452 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
MMP13P45452 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
MMP13P45452 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
MMP13P45452 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.8■□□□□ 0.76
MMP13P45452 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
MMP13P45452 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MMP13P45452 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
MMP13P45452 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.8■□□□□ 0.76
MMP13P45452 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MMP13P45452 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
MMP13P45452 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.8■□□□□ 0.76
MMP13P45452 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
MMP13P45452 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MMP13P45452 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MMP13P45452 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC19.8■□□□□ 0.76
MMP13P45452 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MMP13P45452 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.8■□□□□ 0.76
MMP13P45452 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms