Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC20.26■□□□□ 0.83
SSR1P43307 SDHAP1-207ENST00000440850 2000 ntBASIC20.26■□□□□ 0.83
SSR1P43307 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SSR1P43307 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SSR1P43307 KRT18P16-201ENST00000510337 1294 ntBASIC20.26■□□□□ 0.83
SSR1P43307 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.26■□□□□ 0.83
SSR1P43307 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SSR1P43307 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.26■□□□□ 0.83
SSR1P43307 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
SSR1P43307 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SSR1P43307 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SSR1P43307 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
SSR1P43307 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SSR1P43307 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC20.26■□□□□ 0.83
SSR1P43307 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SSR1P43307 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SSR1P43307 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SSR1P43307 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SSR1P43307 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SSR1P43307 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SSR1P43307 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SSR1P43307 OR6D1P-202ENST00000641007 5290 ntBASIC20.26■□□□□ 0.83
SSR1P43307 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SSR1P43307 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SSR1P43307 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SSR1P43307 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SSR1P43307 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
SSR1P43307 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC20.25■□□□□ 0.83
SSR1P43307 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SSR1P43307 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SSR1P43307 TREX2-204ENST00000370212 861 ntTSL 5 BASIC20.25■□□□□ 0.83
SSR1P43307 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
SSR1P43307 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
SSR1P43307 GAS7-202ENST00000396115 929 ntTSL 5 BASIC20.25■□□□□ 0.83
SSR1P43307 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC20.25■□□□□ 0.83
SSR1P43307 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.25■□□□□ 0.83
SSR1P43307 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SSR1P43307 AC104417.2-201ENST00000562989 1793 ntBASIC20.25■□□□□ 0.83
SSR1P43307 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SSR1P43307 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC20.25■□□□□ 0.83
SSR1P43307 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SSR1P43307 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.25■□□□□ 0.83
SSR1P43307 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SSR1P43307 AL161938.1-201ENST00000569833 2180 ntBASIC20.25■□□□□ 0.83
SSR1P43307 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SSR1P43307 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC20.25■□□□□ 0.83
SSR1P43307 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SSR1P43307 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SSR1P43307 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SSR1P43307 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SSR1P43307 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC20.24■□□□□ 0.83
SSR1P43307 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SSR1P43307 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SSR1P43307 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SSR1P43307 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.24■□□□□ 0.83
SSR1P43307 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SSR1P43307 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SSR1P43307 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SSR1P43307 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC20.24■□□□□ 0.83
SSR1P43307 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC20.24■□□□□ 0.83
SSR1P43307 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.24■□□□□ 0.83
SSR1P43307 AP003097.1-201ENST00000530657 1135 ntBASIC20.24■□□□□ 0.83
SSR1P43307 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SSR1P43307 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SSR1P43307 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SSR1P43307 AC141586.3-201ENST00000562166 1838 ntBASIC20.24■□□□□ 0.83
SSR1P43307 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SSR1P43307 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SSR1P43307 AL049812.1-201ENST00000432563 2267 ntBASIC20.24■□□□□ 0.83
SSR1P43307 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
SSR1P43307 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SSR1P43307 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.24■□□□□ 0.83
SSR1P43307 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SSR1P43307 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SSR1P43307 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SSR1P43307 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SSR1P43307 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
SSR1P43307 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC20.23■□□□□ 0.83
SSR1P43307 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
SSR1P43307 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC20.23■□□□□ 0.83
SSR1P43307 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
SSR1P43307 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.23■□□□□ 0.83
SSR1P43307 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SSR1P43307 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
SSR1P43307 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.23■□□□□ 0.83
SSR1P43307 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.23■□□□□ 0.83
SSR1P43307 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.23■□□□□ 0.83
SSR1P43307 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SSR1P43307 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.23■□□□□ 0.83
SSR1P43307 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.23■□□□□ 0.83
SSR1P43307 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC20.23■□□□□ 0.83
SSR1P43307 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SSR1P43307 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SSR1P43307 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC20.23■□□□□ 0.83
SSR1P43307 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
SSR1P43307 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
SSR1P43307 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.23■□□□□ 0.83
SSR1P43307 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
SSR1P43307 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SSR1P43307 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms