Protein–RNA interactions for Protein: P37088

SCNN1A, Amiloride-sensitive sodium channel subunit alpha, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1AP37088 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
SCNN1AP37088 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.88■□□□□ 0.77
SCNN1AP37088 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC19.88■□□□□ 0.77
SCNN1AP37088 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
SCNN1AP37088 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SCNN1AP37088 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
SCNN1AP37088 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SCNN1AP37088 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.87■□□□□ 0.77
SCNN1AP37088 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SCNN1AP37088 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
SCNN1AP37088 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.87■□□□□ 0.77
SCNN1AP37088 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SCNN1AP37088 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SCNN1AP37088 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SCNN1AP37088 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.87■□□□□ 0.77
SCNN1AP37088 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.87■□□□□ 0.77
SCNN1AP37088 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC19.87■□□□□ 0.77
SCNN1AP37088 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC19.87■□□□□ 0.77
SCNN1AP37088 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SCNN1AP37088 FITM1-202ENST00000559294 800 ntBASIC19.87■□□□□ 0.77
SCNN1AP37088 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
SCNN1AP37088 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SCNN1AP37088 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SCNN1AP37088 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
SCNN1AP37088 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC19.87■□□□□ 0.77
SCNN1AP37088 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
SCNN1AP37088 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SCNN1AP37088 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SCNN1AP37088 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SCNN1AP37088 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SCNN1AP37088 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SCNN1AP37088 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.86■□□□□ 0.77
SCNN1AP37088 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SCNN1AP37088 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SCNN1AP37088 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SCNN1AP37088 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.86■□□□□ 0.77
SCNN1AP37088 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SCNN1AP37088 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SCNN1AP37088 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SCNN1AP37088 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SCNN1AP37088 AL355075.4-201ENST00000554988 638 ntBASIC19.86■□□□□ 0.77
SCNN1AP37088 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.86■□□□□ 0.77
SCNN1AP37088 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC19.86■□□□□ 0.77
SCNN1AP37088 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
SCNN1AP37088 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.86■□□□□ 0.77
SCNN1AP37088 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SCNN1AP37088 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SCNN1AP37088 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
SCNN1AP37088 AC079598.2-202ENST00000546624 1451 ntBASIC19.86■□□□□ 0.77
SCNN1AP37088 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.86■□□□□ 0.77
SCNN1AP37088 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SCNN1AP37088 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
SCNN1AP37088 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SCNN1AP37088 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SCNN1AP37088 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SCNN1AP37088 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SCNN1AP37088 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SCNN1AP37088 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.85■□□□□ 0.77
SCNN1AP37088 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SCNN1AP37088 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SCNN1AP37088 CYGB-204ENST00000589342 815 ntTSL 3 BASIC19.85■□□□□ 0.77
SCNN1AP37088 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.85■□□□□ 0.77
SCNN1AP37088 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SCNN1AP37088 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SCNN1AP37088 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.85■□□□□ 0.77
SCNN1AP37088 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SCNN1AP37088 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SCNN1AP37088 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.85■□□□□ 0.77
SCNN1AP37088 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SCNN1AP37088 AC006333.2-201ENST00000607957 2099 ntBASIC19.85■□□□□ 0.77
SCNN1AP37088 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SCNN1AP37088 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SCNN1AP37088 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.84■□□□□ 0.77
SCNN1AP37088 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
SCNN1AP37088 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SCNN1AP37088 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
SCNN1AP37088 AP000974.1-201ENST00000623909 2387 ntBASIC19.84■□□□□ 0.77
SCNN1AP37088 AC093525.10-201ENST00000625130 1569 ntBASIC19.84■□□□□ 0.77
SCNN1AP37088 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
SCNN1AP37088 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SCNN1AP37088 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.84■□□□□ 0.77
SCNN1AP37088 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SCNN1AP37088 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SCNN1AP37088 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
SCNN1AP37088 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC19.84■□□□□ 0.77
SCNN1AP37088 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
SCNN1AP37088 CRYGFP-201ENST00000418459 633 ntBASIC19.84■□□□□ 0.77
SCNN1AP37088 FDX2-206ENST00000492239 773 ntTSL 2 BASIC19.84■□□□□ 0.77
SCNN1AP37088 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC19.84■□□□□ 0.77
SCNN1AP37088 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.84■□□□□ 0.77
SCNN1AP37088 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.84■□□□□ 0.77
SCNN1AP37088 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.84■□□□□ 0.77
SCNN1AP37088 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SCNN1AP37088 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.84■□□□□ 0.77
SCNN1AP37088 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SCNN1AP37088 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SCNN1AP37088 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
SCNN1AP37088 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SCNN1AP37088 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC19.84■□□□□ 0.77
SCNN1AP37088 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms