Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DMBP28068 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
HLA-DMBP28068 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DMBP28068 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC14.53□□□□□ -0.08
HLA-DMBP28068 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DMBP28068 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DMBP28068 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DMBP28068 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DMBP28068 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DMBP28068 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
HLA-DMBP28068 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DMBP28068 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DMBP28068 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
HLA-DMBP28068 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC14.53□□□□□ -0.08
HLA-DMBP28068 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DMBP28068 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC14.53□□□□□ -0.08
HLA-DMBP28068 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DMBP28068 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DMBP28068 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
HLA-DMBP28068 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
HLA-DMBP28068 IRX5-204ENST00000560154 879 ntTSL 5 BASIC14.53□□□□□ -0.08
HLA-DMBP28068 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC14.53□□□□□ -0.08
HLA-DMBP28068 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC14.53□□□□□ -0.08
HLA-DMBP28068 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DMBP28068 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DMBP28068 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC14.53□□□□□ -0.08
HLA-DMBP28068 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC14.53□□□□□ -0.08
HLA-DMBP28068 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC14.53□□□□□ -0.08
HLA-DMBP28068 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC14.53□□□□□ -0.08
HLA-DMBP28068 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DMBP28068 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DMBP28068 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DMBP28068 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC14.53□□□□□ -0.08
HLA-DMBP28068 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DMBP28068 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
HLA-DMBP28068 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DMBP28068 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DMBP28068 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
HLA-DMBP28068 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
HLA-DMBP28068 IRX1P1-201ENST00000438849 1838 ntBASIC14.52□□□□□ -0.08
HLA-DMBP28068 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC14.52□□□□□ -0.08
HLA-DMBP28068 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
HLA-DMBP28068 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
HLA-DMBP28068 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC14.52□□□□□ -0.08
HLA-DMBP28068 EML3-217ENST00000531557 2509 ntTSL 5 BASIC14.52□□□□□ -0.08
HLA-DMBP28068 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
HLA-DMBP28068 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
HLA-DMBP28068 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
HLA-DMBP28068 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
HLA-DMBP28068 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC14.52□□□□□ -0.09
HLA-DMBP28068 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HLA-DMBP28068 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC14.52□□□□□ -0.09
HLA-DMBP28068 UNC93B5-201ENST00000530315 699 ntBASIC14.52□□□□□ -0.09
HLA-DMBP28068 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
HLA-DMBP28068 MMAB-206ENST00000540016 945 ntTSL 3 BASIC14.52□□□□□ -0.09
HLA-DMBP28068 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC14.52□□□□□ -0.09
HLA-DMBP28068 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC14.52□□□□□ -0.09
HLA-DMBP28068 AC008687.6-201ENST00000596318 630 ntBASIC14.52□□□□□ -0.09
HLA-DMBP28068 AC006058.3-201ENST00000606217 1069 ntBASIC14.52□□□□□ -0.09
HLA-DMBP28068 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
HLA-DMBP28068 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HLA-DMBP28068 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HLA-DMBP28068 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC14.52□□□□□ -0.09
HLA-DMBP28068 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC14.52□□□□□ -0.09
HLA-DMBP28068 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HLA-DMBP28068 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC14.52□□□□□ -0.09
HLA-DMBP28068 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HLA-DMBP28068 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC14.52□□□□□ -0.09
HLA-DMBP28068 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
HLA-DMBP28068 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
HLA-DMBP28068 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HLA-DMBP28068 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
HLA-DMBP28068 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
HLA-DMBP28068 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HLA-DMBP28068 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HLA-DMBP28068 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HLA-DMBP28068 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HLA-DMBP28068 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DMBP28068 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC14.51□□□□□ -0.09
HLA-DMBP28068 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DMBP28068 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC14.51□□□□□ -0.09
HLA-DMBP28068 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DMBP28068 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DMBP28068 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DMBP28068 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DMBP28068 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
HLA-DMBP28068 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DMBP28068 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC14.51□□□□□ -0.09
HLA-DMBP28068 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DMBP28068 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DMBP28068 AC009113.1-201ENST00000570267 2443 ntBASIC14.51□□□□□ -0.09
HLA-DMBP28068 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DMBP28068 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
HLA-DMBP28068 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DMBP28068 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC14.51□□□□□ -0.09
HLA-DMBP28068 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
HLA-DMBP28068 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
HLA-DMBP28068 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC14.51□□□□□ -0.09
HLA-DMBP28068 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC14.51□□□□□ -0.09
HLA-DMBP28068 TUBB8P6-201ENST00000436895 1288 ntBASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms