Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC18.74■□□□□ 0.59
VARSP26640 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
VARSP26640 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.74■□□□□ 0.59
VARSP26640 RPS20-210ENST00000523936 899 ntTSL 2 BASIC18.74■□□□□ 0.59
VARSP26640 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.74■□□□□ 0.59
VARSP26640 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC18.74■□□□□ 0.59
VARSP26640 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.74■□□□□ 0.59
VARSP26640 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
VARSP26640 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.74■□□□□ 0.59
VARSP26640 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
VARSP26640 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
VARSP26640 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.74■□□□□ 0.59
VARSP26640 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
VARSP26640 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
VARSP26640 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
VARSP26640 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
VARSP26640 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
VARSP26640 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
VARSP26640 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
VARSP26640 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
VARSP26640 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.73■□□□□ 0.59
VARSP26640 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
VARSP26640 NOC2LP1-202ENST00000452600 2235 ntBASIC18.73■□□□□ 0.59
VARSP26640 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.73■□□□□ 0.59
VARSP26640 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
VARSP26640 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
VARSP26640 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
VARSP26640 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
VARSP26640 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
VARSP26640 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.73■□□□□ 0.59
VARSP26640 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
VARSP26640 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.73■□□□□ 0.59
VARSP26640 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
VARSP26640 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC18.73■□□□□ 0.59
VARSP26640 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
VARSP26640 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.73■□□□□ 0.59
VARSP26640 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
VARSP26640 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
VARSP26640 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.73■□□□□ 0.59
VARSP26640 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
VARSP26640 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
VARSP26640 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
VARSP26640 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.73■□□□□ 0.59
VARSP26640 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
VARSP26640 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
VARSP26640 ZNF815P-204ENST00000434898 1737 ntBASIC18.72■□□□□ 0.59
VARSP26640 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
VARSP26640 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
VARSP26640 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
VARSP26640 MDFI-202ENST00000373050 809 ntTSL 2 BASIC18.72■□□□□ 0.59
VARSP26640 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
VARSP26640 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.72■□□□□ 0.59
VARSP26640 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC18.72■□□□□ 0.59
VARSP26640 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
VARSP26640 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.72■□□□□ 0.59
VARSP26640 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
VARSP26640 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.72■□□□□ 0.59
VARSP26640 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.72■□□□□ 0.59
VARSP26640 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC18.72■□□□□ 0.59
VARSP26640 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.72■□□□□ 0.59
VARSP26640 AC233702.5-201ENST00000584107 538 ntBASIC18.72■□□□□ 0.59
VARSP26640 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
VARSP26640 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC18.72■□□□□ 0.59
VARSP26640 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.72■□□□□ 0.59
VARSP26640 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
VARSP26640 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
VARSP26640 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
VARSP26640 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
VARSP26640 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
VARSP26640 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
VARSP26640 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
VARSP26640 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
VARSP26640 AC120498.9-201ENST00000339021 3867 ntBASIC18.71■□□□□ 0.59
VARSP26640 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
VARSP26640 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
VARSP26640 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
VARSP26640 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
VARSP26640 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
VARSP26640 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC18.71■□□□□ 0.59
VARSP26640 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
VARSP26640 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.71■□□□□ 0.59
VARSP26640 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
VARSP26640 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
VARSP26640 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.71■□□□□ 0.59
VARSP26640 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
VARSP26640 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
VARSP26640 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
VARSP26640 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
VARSP26640 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
VARSP26640 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
VARSP26640 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
VARSP26640 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
VARSP26640 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
VARSP26640 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
VARSP26640 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.71■□□□□ 0.59
VARSP26640 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
VARSP26640 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.58
VARSP26640 AC020916.1-201ENST00000587762 1774 ntBASIC18.7■□□□□ 0.58
VARSP26640 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VARSP26640 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms