Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 AL158047.1-201ENST00000445918 881 ntBASIC19.47■□□□□ 0.71
PTPN3P26045 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PTPN3P26045 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.47■□□□□ 0.71
PTPN3P26045 AC073195.1-201ENST00000607241 877 ntBASIC19.47■□□□□ 0.71
PTPN3P26045 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PTPN3P26045 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.47■□□□□ 0.71
PTPN3P26045 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PTPN3P26045 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.47■□□□□ 0.71
PTPN3P26045 CROCCP3-202ENST00000420820 1947 ntBASIC19.47■□□□□ 0.71
PTPN3P26045 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PTPN3P26045 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTPN3P26045 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PTPN3P26045 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PTPN3P26045 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTPN3P26045 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.46■□□□□ 0.71
PTPN3P26045 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC19.46■□□□□ 0.71
PTPN3P26045 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC19.46■□□□□ 0.71
PTPN3P26045 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.46■□□□□ 0.71
PTPN3P26045 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC19.46■□□□□ 0.71
PTPN3P26045 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PTPN3P26045 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.46■□□□□ 0.71
PTPN3P26045 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.46■□□□□ 0.71
PTPN3P26045 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC19.46■□□□□ 0.71
PTPN3P26045 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
PTPN3P26045 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.46■□□□□ 0.71
PTPN3P26045 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTPN3P26045 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTPN3P26045 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
PTPN3P26045 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
PTPN3P26045 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
PTPN3P26045 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PTPN3P26045 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PTPN3P26045 RCC2P6-201ENST00000526625 1557 ntBASIC19.45■□□□□ 0.7
PTPN3P26045 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PTPN3P26045 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.45■□□□□ 0.7
PTPN3P26045 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PTPN3P26045 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PTPN3P26045 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
PTPN3P26045 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC19.45■□□□□ 0.7
PTPN3P26045 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
PTPN3P26045 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.45■□□□□ 0.7
PTPN3P26045 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.45■□□□□ 0.7
PTPN3P26045 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
PTPN3P26045 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PTPN3P26045 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
PTPN3P26045 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC19.45■□□□□ 0.7
PTPN3P26045 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.45■□□□□ 0.7
PTPN3P26045 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
PTPN3P26045 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PTPN3P26045 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
PTPN3P26045 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PTPN3P26045 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PTPN3P26045 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.44■□□□□ 0.7
PTPN3P26045 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PTPN3P26045 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PTPN3P26045 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.44■□□□□ 0.7
PTPN3P26045 KRT8P11-201ENST00000409686 1436 ntBASIC19.44■□□□□ 0.7
PTPN3P26045 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.44■□□□□ 0.7
PTPN3P26045 AC120498.9-201ENST00000339021 3867 ntBASIC19.44■□□□□ 0.7
PTPN3P26045 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.44■□□□□ 0.7
PTPN3P26045 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.44■□□□□ 0.7
PTPN3P26045 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PTPN3P26045 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PTPN3P26045 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PTPN3P26045 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
PTPN3P26045 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
PTPN3P26045 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.44■□□□□ 0.7
PTPN3P26045 AC091390.4-202ENST00000476426 537 ntBASIC19.44■□□□□ 0.7
PTPN3P26045 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PTPN3P26045 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
PTPN3P26045 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.44■□□□□ 0.7
PTPN3P26045 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
PTPN3P26045 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PTPN3P26045 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PTPN3P26045 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
PTPN3P26045 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
PTPN3P26045 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
PTPN3P26045 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTPN3P26045 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTPN3P26045 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTPN3P26045 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC19.43■□□□□ 0.7
PTPN3P26045 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.43■□□□□ 0.7
PTPN3P26045 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
PTPN3P26045 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.43■□□□□ 0.7
PTPN3P26045 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PTPN3P26045 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTPN3P26045 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.43■□□□□ 0.7
PTPN3P26045 UBE2SP1-201ENST00000450587 669 ntBASIC19.43■□□□□ 0.7
PTPN3P26045 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
PTPN3P26045 AC026271.3-201ENST00000571884 352 ntBASIC19.43■□□□□ 0.7
PTPN3P26045 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
PTPN3P26045 AL031985.4-201ENST00000642138 673 ntBASIC19.43■□□□□ 0.7
PTPN3P26045 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTPN3P26045 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTPN3P26045 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTPN3P26045 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTPN3P26045 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
PTPN3P26045 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PTPN3P26045 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTPN3P26045 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms