Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC14.92□□□□□ -0.02
CD28P10747 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
CD28P10747 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
CD28P10747 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
CD28P10747 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CD28P10747 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
CD28P10747 KRT8P11-201ENST00000409686 1436 ntBASIC14.92□□□□□ -0.02
CD28P10747 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CD28P10747 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CD28P10747 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CD28P10747 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CD28P10747 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC14.91□□□□□ -0.02
CD28P10747 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
CD28P10747 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
CD28P10747 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CD28P10747 ANKRD20A18P-201ENST00000359341 492 ntBASIC14.91□□□□□ -0.02
CD28P10747 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC14.91□□□□□ -0.02
CD28P10747 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CD28P10747 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC14.91□□□□□ -0.02
CD28P10747 FAM8A6P-201ENST00000407496 1135 ntBASIC14.91□□□□□ -0.02
CD28P10747 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC14.91□□□□□ -0.02
CD28P10747 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CD28P10747 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC14.91□□□□□ -0.02
CD28P10747 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC14.91□□□□□ -0.02
CD28P10747 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC14.91□□□□□ -0.02
CD28P10747 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC14.91□□□□□ -0.02
CD28P10747 AL512604.3-201ENST00000569583 964 ntBASIC14.91□□□□□ -0.02
CD28P10747 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CD28P10747 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
CD28P10747 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
CD28P10747 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CD28P10747 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
CD28P10747 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CD28P10747 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC14.91□□□□□ -0.02
CD28P10747 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
CD28P10747 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CD28P10747 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC14.91□□□□□ -0.02
CD28P10747 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CD28P10747 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CD28P10747 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC14.9□□□□□ -0.02
CD28P10747 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CD28P10747 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CD28P10747 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC14.9□□□□□ -0.02
CD28P10747 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CD28P10747 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CD28P10747 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CD28P10747 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC14.9□□□□□ -0.02
CD28P10747 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CD28P10747 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CD28P10747 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC14.9□□□□□ -0.02
CD28P10747 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CD28P10747 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CD28P10747 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CD28P10747 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CD28P10747 SAPCD2P2-201ENST00000431719 1174 ntBASIC14.9□□□□□ -0.02
CD28P10747 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC14.9□□□□□ -0.02
CD28P10747 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
CD28P10747 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC14.9□□□□□ -0.02
CD28P10747 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC14.9□□□□□ -0.02
CD28P10747 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC14.9□□□□□ -0.02
CD28P10747 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC14.9□□□□□ -0.02
CD28P10747 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC14.9□□□□□ -0.02
CD28P10747 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CD28P10747 AC140113.3-201ENST00000605663 199 ntBASIC14.9□□□□□ -0.02
CD28P10747 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC14.9□□□□□ -0.02
CD28P10747 AL023973.1-201ENST00000624619 620 ntBASIC14.9□□□□□ -0.02
CD28P10747 AL358472.4-201ENST00000633140 710 ntBASIC14.9□□□□□ -0.02
CD28P10747 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CD28P10747 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
CD28P10747 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CD28P10747 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CD28P10747 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
CD28P10747 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC14.9□□□□□ -0.02
CD28P10747 LINC01006-201ENST00000333319 2292 ntBASIC14.9□□□□□ -0.02
CD28P10747 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CD28P10747 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CD28P10747 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CD28P10747 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CD28P10747 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
CD28P10747 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CD28P10747 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC14.89□□□□□ -0.03
CD28P10747 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD28P10747 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CD28P10747 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD28P10747 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC14.89□□□□□ -0.03
CD28P10747 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD28P10747 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC14.89□□□□□ -0.03
CD28P10747 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD28P10747 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CD28P10747 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD28P10747 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD28P10747 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC14.89□□□□□ -0.03
CD28P10747 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CD28P10747 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC14.89□□□□□ -0.03
CD28P10747 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC14.89□□□□□ -0.03
CD28P10747 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC14.89□□□□□ -0.03
CD28P10747 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC14.89□□□□□ -0.03
CD28P10747 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
CD28P10747 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC14.89□□□□□ -0.03
CD28P10747 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms