Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC15.85■□□□□ 0.13
CTSDP07339 GXYLT1P2-201ENST00000433312 1230 ntBASIC15.85■□□□□ 0.13
CTSDP07339 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC15.85■□□□□ 0.13
CTSDP07339 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC15.85■□□□□ 0.13
CTSDP07339 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC15.85■□□□□ 0.13
CTSDP07339 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CTSDP07339 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CTSDP07339 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CTSDP07339 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
CTSDP07339 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CTSDP07339 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC15.85■□□□□ 0.13
CTSDP07339 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CTSDP07339 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC15.85■□□□□ 0.13
CTSDP07339 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
CTSDP07339 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC15.85■□□□□ 0.13
CTSDP07339 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CTSDP07339 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CTSDP07339 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC15.85■□□□□ 0.13
CTSDP07339 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
CTSDP07339 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC15.85■□□□□ 0.13
CTSDP07339 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CTSDP07339 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CTSDP07339 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CTSDP07339 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CTSDP07339 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC15.84■□□□□ 0.13
CTSDP07339 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CTSDP07339 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CTSDP07339 KRT17P1-201ENST00000399211 1546 ntBASIC15.84■□□□□ 0.13
CTSDP07339 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CTSDP07339 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
CTSDP07339 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CTSDP07339 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
CTSDP07339 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC15.84■□□□□ 0.13
CTSDP07339 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CTSDP07339 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC15.84■□□□□ 0.13
CTSDP07339 AL162430.1-201ENST00000480705 870 ntBASIC15.84■□□□□ 0.13
CTSDP07339 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC15.84■□□□□ 0.13
CTSDP07339 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC15.84■□□□□ 0.13
CTSDP07339 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CTSDP07339 BID-214ENST00000617586 542 ntTSL 5 BASIC15.84■□□□□ 0.13
CTSDP07339 OR10C1-204ENST00000622521 1039 ntBASIC15.84■□□□□ 0.13
CTSDP07339 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CTSDP07339 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
CTSDP07339 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
CTSDP07339 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CTSDP07339 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CTSDP07339 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CTSDP07339 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CTSDP07339 KRT8P8-201ENST00000434750 1448 ntBASIC15.84■□□□□ 0.13
CTSDP07339 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC15.84■□□□□ 0.13
CTSDP07339 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC15.84■□□□□ 0.13
CTSDP07339 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CTSDP07339 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC15.84■□□□□ 0.13
CTSDP07339 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC15.84■□□□□ 0.13
CTSDP07339 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CTSDP07339 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CTSDP07339 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
CTSDP07339 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC15.83■□□□□ 0.13
CTSDP07339 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.13
CTSDP07339 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
CTSDP07339 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
CTSDP07339 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CTSDP07339 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC15.83■□□□□ 0.13
CTSDP07339 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CTSDP07339 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CTSDP07339 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
CTSDP07339 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
CTSDP07339 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CTSDP07339 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC15.83■□□□□ 0.12
CTSDP07339 AC073592.3-201ENST00000625118 1834 ntBASIC15.83■□□□□ 0.12
CTSDP07339 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CTSDP07339 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CTSDP07339 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CTSDP07339 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CTSDP07339 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CTSDP07339 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC15.83■□□□□ 0.12
CTSDP07339 GPX1P1-201ENST00000388829 606 ntBASIC15.83■□□□□ 0.12
CTSDP07339 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CTSDP07339 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CTSDP07339 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC15.83■□□□□ 0.12
CTSDP07339 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC15.83■□□□□ 0.12
CTSDP07339 WWOX-218ENST00000627394 894 ntTSL 5 BASIC15.83■□□□□ 0.12
CTSDP07339 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC15.83■□□□□ 0.12
CTSDP07339 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC15.83■□□□□ 0.12
CTSDP07339 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CTSDP07339 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CTSDP07339 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CTSDP07339 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
CTSDP07339 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CTSDP07339 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CTSDP07339 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
CTSDP07339 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CTSDP07339 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CTSDP07339 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
CTSDP07339 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC15.83■□□□□ 0.12
CTSDP07339 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CTSDP07339 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC15.83■□□□□ 0.12
CTSDP07339 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC15.83■□□□□ 0.12
CTSDP07339 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CTSDP07339 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms