Protein–RNA interactions for Protein: P04350

TUBB4A, Tubulin beta-4A chain, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4AP04350 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC20.46■□□□□ 0.87
TUBB4AP04350 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
TUBB4AP04350 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
TUBB4AP04350 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TUBB4AP04350 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC20.46■□□□□ 0.87
TUBB4AP04350 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TUBB4AP04350 LINC02228-203ENST00000641970 1355 ntBASIC20.46■□□□□ 0.87
TUBB4AP04350 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TUBB4AP04350 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TUBB4AP04350 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TUBB4AP04350 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
TUBB4AP04350 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TUBB4AP04350 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
TUBB4AP04350 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TUBB4AP04350 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TUBB4AP04350 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.45■□□□□ 0.86
TUBB4AP04350 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.45■□□□□ 0.86
TUBB4AP04350 MIR6084-201ENST00000622012 110 ntBASIC20.45■□□□□ 0.86
TUBB4AP04350 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
TUBB4AP04350 HTR7P1-202ENST00000624664 4411 ntBASIC20.45■□□□□ 0.86
TUBB4AP04350 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TUBB4AP04350 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC20.45■□□□□ 0.86
TUBB4AP04350 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TUBB4AP04350 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TUBB4AP04350 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
TUBB4AP04350 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TUBB4AP04350 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TUBB4AP04350 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC20.44■□□□□ 0.86
TUBB4AP04350 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
TUBB4AP04350 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TUBB4AP04350 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
TUBB4AP04350 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TUBB4AP04350 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC20.44■□□□□ 0.86
TUBB4AP04350 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TUBB4AP04350 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TUBB4AP04350 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC20.44■□□□□ 0.86
TUBB4AP04350 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TUBB4AP04350 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
TUBB4AP04350 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
TUBB4AP04350 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.44■□□□□ 0.86
TUBB4AP04350 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TUBB4AP04350 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
TUBB4AP04350 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TUBB4AP04350 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.44■□□□□ 0.86
TUBB4AP04350 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.44■□□□□ 0.86
TUBB4AP04350 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
TUBB4AP04350 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TUBB4AP04350 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TUBB4AP04350 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TUBB4AP04350 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC20.44■□□□□ 0.86
TUBB4AP04350 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.44■□□□□ 0.86
TUBB4AP04350 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TUBB4AP04350 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
TUBB4AP04350 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC20.44■□□□□ 0.86
TUBB4AP04350 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
TUBB4AP04350 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TUBB4AP04350 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TUBB4AP04350 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TUBB4AP04350 AC134043.2-201ENST00000624206 2238 ntBASIC20.43■□□□□ 0.86
TUBB4AP04350 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TUBB4AP04350 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC20.43■□□□□ 0.86
TUBB4AP04350 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC20.43■□□□□ 0.86
TUBB4AP04350 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TUBB4AP04350 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TUBB4AP04350 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TUBB4AP04350 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TUBB4AP04350 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TUBB4AP04350 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.43■□□□□ 0.86
TUBB4AP04350 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TUBB4AP04350 AC027612.3-201ENST00000413684 1047 ntBASIC20.43■□□□□ 0.86
TUBB4AP04350 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.43■□□□□ 0.86
TUBB4AP04350 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.43■□□□□ 0.86
TUBB4AP04350 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TUBB4AP04350 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.43■□□□□ 0.86
TUBB4AP04350 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.43■□□□□ 0.86
TUBB4AP04350 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TUBB4AP04350 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
TUBB4AP04350 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TUBB4AP04350 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
TUBB4AP04350 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TUBB4AP04350 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
TUBB4AP04350 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TUBB4AP04350 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TUBB4AP04350 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
TUBB4AP04350 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
TUBB4AP04350 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC20.42■□□□□ 0.86
TUBB4AP04350 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TUBB4AP04350 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TUBB4AP04350 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TUBB4AP04350 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TUBB4AP04350 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
TUBB4AP04350 KRT18P68-201ENST00000392293 1000 ntBASIC20.42■□□□□ 0.86
TUBB4AP04350 TERF1P5-201ENST00000477545 1207 ntBASIC20.42■□□□□ 0.86
TUBB4AP04350 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.42■□□□□ 0.86
TUBB4AP04350 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TUBB4AP04350 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
TUBB4AP04350 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TUBB4AP04350 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TUBB4AP04350 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
TUBB4AP04350 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms