Protein–RNA interactions for Protein: P04234

CD3D, T-cell surface glycoprotein CD3 delta chain, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD3DP04234 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC16.2■□□□□ 0.18
CD3DP04234 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CD3DP04234 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CD3DP04234 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CD3DP04234 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
CD3DP04234 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CD3DP04234 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.2■□□□□ 0.18
CD3DP04234 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CD3DP04234 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CD3DP04234 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CD3DP04234 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CD3DP04234 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC16.19■□□□□ 0.18
CD3DP04234 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC16.19■□□□□ 0.18
CD3DP04234 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CD3DP04234 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.19■□□□□ 0.18
CD3DP04234 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CD3DP04234 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CD3DP04234 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CD3DP04234 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CD3DP04234 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CD3DP04234 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC16.19■□□□□ 0.18
CD3DP04234 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC16.19■□□□□ 0.18
CD3DP04234 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CD3DP04234 JTB-203ENST00000368589 1216 ntTSL 2 BASIC16.19■□□□□ 0.18
CD3DP04234 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC16.19■□□□□ 0.18
CD3DP04234 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CD3DP04234 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CD3DP04234 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC16.19■□□□□ 0.18
CD3DP04234 KRT18P61-201ENST00000585825 1298 ntBASIC16.19■□□□□ 0.18
CD3DP04234 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CD3DP04234 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CD3DP04234 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CD3DP04234 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CD3DP04234 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CD3DP04234 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.19■□□□□ 0.18
CD3DP04234 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CD3DP04234 MKRN4P-201ENST00000444706 1521 ntBASIC16.19■□□□□ 0.18
CD3DP04234 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CD3DP04234 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CD3DP04234 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CD3DP04234 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
CD3DP04234 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC16.18■□□□□ 0.18
CD3DP04234 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CD3DP04234 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CD3DP04234 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CD3DP04234 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CD3DP04234 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.18■□□□□ 0.18
CD3DP04234 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC16.18■□□□□ 0.18
CD3DP04234 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC16.18■□□□□ 0.18
CD3DP04234 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CD3DP04234 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CD3DP04234 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.18■□□□□ 0.18
CD3DP04234 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CD3DP04234 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC16.18■□□□□ 0.18
CD3DP04234 C2orf69P4-201ENST00000565394 541 ntBASIC16.18■□□□□ 0.18
CD3DP04234 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC16.18■□□□□ 0.18
CD3DP04234 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CD3DP04234 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CD3DP04234 RAB43-208ENST00000615093 783 ntTSL 5 BASIC16.18■□□□□ 0.18
CD3DP04234 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC16.18■□□□□ 0.18
CD3DP04234 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CD3DP04234 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CD3DP04234 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC16.18■□□□□ 0.18
CD3DP04234 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CD3DP04234 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.18■□□□□ 0.18
CD3DP04234 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CD3DP04234 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CD3DP04234 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CD3DP04234 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CD3DP04234 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CD3DP04234 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC16.18■□□□□ 0.18
CD3DP04234 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CD3DP04234 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
CD3DP04234 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CD3DP04234 AC012313.1-201ENST00000593393 3059 ntBASIC16.17■□□□□ 0.18
CD3DP04234 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CD3DP04234 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CD3DP04234 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CD3DP04234 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CD3DP04234 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CD3DP04234 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CD3DP04234 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC16.17■□□□□ 0.18
CD3DP04234 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CD3DP04234 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CD3DP04234 CALM3-202ENST00000391918 702 ntTSL 2 BASIC16.17■□□□□ 0.18
CD3DP04234 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC16.17■□□□□ 0.18
CD3DP04234 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
CD3DP04234 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC16.17■□□□□ 0.18
CD3DP04234 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CD3DP04234 CYP2T3P-201ENST00000601990 817 ntBASIC16.17■□□□□ 0.18
CD3DP04234 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
CD3DP04234 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CD3DP04234 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CD3DP04234 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CD3DP04234 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.17■□□□□ 0.18
CD3DP04234 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CD3DP04234 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CD3DP04234 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
CD3DP04234 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CD3DP04234 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms