Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
APOBP04114 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
APOBP04114 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
APOBP04114 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
APOBP04114 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC11.92□□□□□ -0.5
APOBP04114 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC11.92□□□□□ -0.5
APOBP04114 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
APOBP04114 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
APOBP04114 PMS2P2-201ENST00000425039 1128 ntBASIC11.92□□□□□ -0.5
APOBP04114 MOK-208ENST00000519058 917 ntTSL 2 BASIC11.92□□□□□ -0.5
APOBP04114 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC11.92□□□□□ -0.5
APOBP04114 AC027796.2-201ENST00000575326 344 ntBASIC11.92□□□□□ -0.5
APOBP04114 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC11.92□□□□□ -0.5
APOBP04114 AC133561.1-201ENST00000568600 2415 ntBASIC11.92□□□□□ -0.5
APOBP04114 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC11.92□□□□□ -0.5
APOBP04114 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
APOBP04114 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
APOBP04114 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
APOBP04114 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
APOBP04114 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
APOBP04114 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC11.91□□□□□ -0.5
APOBP04114 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
APOBP04114 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC11.91□□□□□ -0.5
APOBP04114 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC11.91□□□□□ -0.5
APOBP04114 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
APOBP04114 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC11.91□□□□□ -0.5
APOBP04114 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
APOBP04114 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC11.91□□□□□ -0.5
APOBP04114 NMU-202ENST00000505262 693 ntTSL 3 BASIC11.91□□□□□ -0.5
APOBP04114 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
APOBP04114 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
APOBP04114 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
APOBP04114 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC11.91□□□□□ -0.5
APOBP04114 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
APOBP04114 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
APOBP04114 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
APOBP04114 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC11.91□□□□□ -0.5
APOBP04114 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC11.91□□□□□ -0.5
APOBP04114 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
APOBP04114 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
APOBP04114 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
APOBP04114 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC11.91□□□□□ -0.5
APOBP04114 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
APOBP04114 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
APOBP04114 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
APOBP04114 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
APOBP04114 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
APOBP04114 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
APOBP04114 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
APOBP04114 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
APOBP04114 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
APOBP04114 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
APOBP04114 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC11.9□□□□□ -0.5
APOBP04114 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC11.9□□□□□ -0.5
APOBP04114 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC11.9□□□□□ -0.5
APOBP04114 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
APOBP04114 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC11.9□□□□□ -0.5
APOBP04114 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC11.9□□□□□ -0.5
APOBP04114 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
APOBP04114 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
APOBP04114 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
APOBP04114 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
APOBP04114 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC11.9□□□□□ -0.5
APOBP04114 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC11.9□□□□□ -0.5
APOBP04114 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
APOBP04114 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC11.9□□□□□ -0.5
APOBP04114 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
APOBP04114 AP005212.1-201ENST00000581547 1997 ntBASIC11.9□□□□□ -0.5
APOBP04114 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
APOBP04114 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
APOBP04114 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
APOBP04114 RPSAP43-201ENST00000402237 625 ntBASIC11.9□□□□□ -0.5
APOBP04114 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC11.9□□□□□ -0.5
APOBP04114 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC11.9□□□□□ -0.5
APOBP04114 NSUN5P1-202ENST00000421140 1535 ntBASIC11.9□□□□□ -0.5
APOBP04114 NSUN5P2-203ENST00000457352 1529 ntBASIC11.9□□□□□ -0.5
APOBP04114 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
APOBP04114 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
APOBP04114 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
APOBP04114 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
APOBP04114 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
APOBP04114 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
APOBP04114 AL035633.1-201ENST00000406139 838 ntBASIC11.89□□□□□ -0.51
APOBP04114 Z69720.1-201ENST00000601483 472 ntBASIC11.89□□□□□ -0.51
APOBP04114 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
APOBP04114 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
APOBP04114 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC11.89□□□□□ -0.51
APOBP04114 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC11.89□□□□□ -0.51
APOBP04114 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
APOBP04114 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
APOBP04114 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
APOBP04114 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC11.89□□□□□ -0.51
APOBP04114 AL592071.1-201ENST00000611956 408 ntBASIC11.89□□□□□ -0.51
APOBP04114 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
APOBP04114 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC11.89□□□□□ -0.51
APOBP04114 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC11.89□□□□□ -0.51
APOBP04114 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
APOBP04114 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
APOBP04114 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC11.89□□□□□ -0.51
APOBP04114 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms