Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
APOEP02649 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
APOEP02649 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
APOEP02649 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
APOEP02649 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.97■□□□□ 0.79
APOEP02649 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
APOEP02649 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
APOEP02649 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC19.97■□□□□ 0.79
APOEP02649 FAM207BP-201ENST00000447172 505 ntBASIC19.97■□□□□ 0.79
APOEP02649 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC19.97■□□□□ 0.79
APOEP02649 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC19.97■□□□□ 0.79
APOEP02649 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
APOEP02649 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
APOEP02649 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.97■□□□□ 0.79
APOEP02649 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.97■□□□□ 0.79
APOEP02649 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
APOEP02649 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
APOEP02649 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.97■□□□□ 0.79
APOEP02649 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
APOEP02649 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
APOEP02649 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
APOEP02649 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
APOEP02649 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
APOEP02649 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.96■□□□□ 0.79
APOEP02649 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
APOEP02649 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
APOEP02649 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.96■□□□□ 0.79
APOEP02649 AC091390.4-202ENST00000476426 537 ntBASIC19.96■□□□□ 0.79
APOEP02649 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.96■□□□□ 0.79
APOEP02649 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC19.96■□□□□ 0.79
APOEP02649 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19.96■□□□□ 0.79
APOEP02649 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.96■□□□□ 0.79
APOEP02649 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
APOEP02649 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.96■□□□□ 0.79
APOEP02649 AC130371.2-201ENST00000619443 611 ntBASIC19.96■□□□□ 0.79
APOEP02649 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.96■□□□□ 0.79
APOEP02649 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.96■□□□□ 0.79
APOEP02649 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
APOEP02649 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.96■□□□□ 0.79
APOEP02649 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
APOEP02649 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
APOEP02649 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.96■□□□□ 0.79
APOEP02649 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.96■□□□□ 0.79
APOEP02649 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
APOEP02649 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
APOEP02649 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.95■□□□□ 0.78
APOEP02649 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
APOEP02649 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
APOEP02649 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
APOEP02649 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
APOEP02649 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
APOEP02649 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
APOEP02649 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
APOEP02649 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
APOEP02649 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
APOEP02649 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.95■□□□□ 0.78
APOEP02649 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
APOEP02649 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
APOEP02649 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
APOEP02649 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.95■□□□□ 0.78
APOEP02649 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
APOEP02649 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC19.95■□□□□ 0.78
APOEP02649 TSPY15P-201ENST00000457163 923 ntBASIC19.95■□□□□ 0.78
APOEP02649 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
APOEP02649 BX088651.1-201ENST00000540551 451 ntBASIC19.95■□□□□ 0.78
APOEP02649 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.95■□□□□ 0.78
APOEP02649 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
APOEP02649 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.95■□□□□ 0.78
APOEP02649 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
APOEP02649 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
APOEP02649 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
APOEP02649 KRT8P41-201ENST00000533985 1514 ntBASIC19.95■□□□□ 0.78
APOEP02649 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.95■□□□□ 0.78
APOEP02649 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
APOEP02649 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.95■□□□□ 0.78
APOEP02649 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
APOEP02649 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
APOEP02649 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
APOEP02649 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
APOEP02649 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
APOEP02649 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
APOEP02649 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
APOEP02649 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.94■□□□□ 0.78
APOEP02649 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
APOEP02649 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
APOEP02649 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
APOEP02649 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
APOEP02649 TNXA-203ENST00000507684 2038 ntBASIC19.94■□□□□ 0.78
APOEP02649 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.94■□□□□ 0.78
APOEP02649 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
APOEP02649 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
APOEP02649 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
APOEP02649 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
APOEP02649 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.94■□□□□ 0.78
APOEP02649 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.94■□□□□ 0.78
APOEP02649 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
APOEP02649 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC19.94■□□□□ 0.78
APOEP02649 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
APOEP02649 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.94■□□□□ 0.78
APOEP02649 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms