Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC15.11■□□□□ 0.01
IFNA1P01562 CDV3P1-201ENST00000471403 739 ntBASIC15.11■□□□□ 0.01
IFNA1P01562 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
IFNA1P01562 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
IFNA1P01562 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
IFNA1P01562 AL512631.2-201ENST00000604634 923 ntBASIC15.11■□□□□ 0.01
IFNA1P01562 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC15.11■□□□□ 0.01
IFNA1P01562 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
IFNA1P01562 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC15.11■□□□□ 0.01
IFNA1P01562 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
IFNA1P01562 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
IFNA1P01562 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
IFNA1P01562 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
IFNA1P01562 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
IFNA1P01562 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC15.11■□□□□ 0.01
IFNA1P01562 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC15.11■□□□□ 0.01
IFNA1P01562 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
IFNA1P01562 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
IFNA1P01562 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC15.11■□□□□ 0.01
IFNA1P01562 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
IFNA1P01562 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
IFNA1P01562 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
IFNA1P01562 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
IFNA1P01562 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC15.1■□□□□ 0.01
IFNA1P01562 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC15.1■□□□□ 0.01
IFNA1P01562 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC15.1■□□□□ 0.01
IFNA1P01562 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
IFNA1P01562 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
IFNA1P01562 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
IFNA1P01562 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
IFNA1P01562 SERP1-208ENST00000491660 830 ntTSL 2 BASIC15.1■□□□□ 0.01
IFNA1P01562 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
IFNA1P01562 GRAMD4P7-201ENST00000578182 1232 ntBASIC15.1■□□□□ 0.01
IFNA1P01562 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
IFNA1P01562 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC15.1■□□□□ 0.01
IFNA1P01562 CPT2-209ENST00000636935 803 ntTSL 5 BASIC15.1■□□□□ 0.01
IFNA1P01562 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
IFNA1P01562 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
IFNA1P01562 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
IFNA1P01562 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
IFNA1P01562 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
IFNA1P01562 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
IFNA1P01562 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
IFNA1P01562 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
IFNA1P01562 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
IFNA1P01562 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
IFNA1P01562 AL162741.1-201ENST00000565563 1558 ntBASIC15.1■□□□□ 0.01
IFNA1P01562 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC15.1■□□□□ 0.01
IFNA1P01562 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
IFNA1P01562 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
IFNA1P01562 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
IFNA1P01562 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
IFNA1P01562 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC15.09■□□□□ 0.01
IFNA1P01562 AC087633.2-202ENST00000565166 1439 ntBASIC15.09■□□□□ 0.01
IFNA1P01562 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
IFNA1P01562 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
IFNA1P01562 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC15.09■□□□□ 0.01
IFNA1P01562 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
IFNA1P01562 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.09■□□□□ 0.01
IFNA1P01562 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
IFNA1P01562 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
IFNA1P01562 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
IFNA1P01562 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC15.09■□□□□ 0.01
IFNA1P01562 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
IFNA1P01562 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.09■□□□□ 0.01
IFNA1P01562 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC15.09■□□□□ 0.01
IFNA1P01562 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
IFNA1P01562 AC091799.1-201ENST00000422823 811 ntBASIC15.09■□□□□ 0.01
IFNA1P01562 AC009299.2-201ENST00000482477 511 ntBASIC15.09■□□□□ 0.01
IFNA1P01562 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC15.09■□□□□ 0.01
IFNA1P01562 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC15.09■□□□□ 0.01
IFNA1P01562 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
IFNA1P01562 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
IFNA1P01562 PTBP1P-201ENST00000554374 1601 ntBASIC15.09■□□□□ 0.01
IFNA1P01562 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC15.09■□□□□ 0.01
IFNA1P01562 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC15.09■□□□□ 0.01
IFNA1P01562 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
IFNA1P01562 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC15.09■□□□□ 0.01
IFNA1P01562 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
IFNA1P01562 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
IFNA1P01562 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
IFNA1P01562 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC15.09■□□□□ 0.01
IFNA1P01562 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
IFNA1P01562 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC15.08■□□□□ 0.01
IFNA1P01562 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
IFNA1P01562 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC15.08■□□□□ 0.01
IFNA1P01562 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
IFNA1P01562 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
IFNA1P01562 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
IFNA1P01562 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
IFNA1P01562 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
IFNA1P01562 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC15.08■□□□□ 0
IFNA1P01562 AC139713.2-201ENST00000641328 2723 ntBASIC15.08■□□□□ 0
IFNA1P01562 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
IFNA1P01562 NAA20-201ENST00000310450 920 ntTSL 2 BASIC15.08■□□□□ 0
IFNA1P01562 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
IFNA1P01562 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
IFNA1P01562 QDPR-206ENST00000508623 601 ntTSL 3 BASIC15.08■□□□□ 0
IFNA1P01562 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC15.08■□□□□ 0
IFNA1P01562 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms