Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC19.54■□□□□ 0.72
MT-CO1P00395 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
MT-CO1P00395 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC19.54■□□□□ 0.72
MT-CO1P00395 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.54■□□□□ 0.72
MT-CO1P00395 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
MT-CO1P00395 NAPSB-206ENST00000562112 1266 ntBASIC19.54■□□□□ 0.72
MT-CO1P00395 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC19.54■□□□□ 0.72
MT-CO1P00395 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.54■□□□□ 0.72
MT-CO1P00395 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
MT-CO1P00395 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
MT-CO1P00395 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
MT-CO1P00395 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.54■□□□□ 0.72
MT-CO1P00395 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
MT-CO1P00395 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
MT-CO1P00395 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.54■□□□□ 0.72
MT-CO1P00395 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
MT-CO1P00395 Z82202.1-201ENST00000623446 1880 ntBASIC19.54■□□□□ 0.72
MT-CO1P00395 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.54■□□□□ 0.72
MT-CO1P00395 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.54■□□□□ 0.72
MT-CO1P00395 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
MT-CO1P00395 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.53■□□□□ 0.72
MT-CO1P00395 AC120498.9-201ENST00000339021 3867 ntBASIC19.53■□□□□ 0.72
MT-CO1P00395 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
MT-CO1P00395 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
MT-CO1P00395 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
MT-CO1P00395 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
MT-CO1P00395 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
MT-CO1P00395 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
MT-CO1P00395 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.53■□□□□ 0.72
MT-CO1P00395 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.53■□□□□ 0.72
MT-CO1P00395 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
MT-CO1P00395 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.53■□□□□ 0.72
MT-CO1P00395 AC145285.6-201ENST00000604632 637 ntBASIC19.53■□□□□ 0.72
MT-CO1P00395 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
MT-CO1P00395 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.53■□□□□ 0.72
MT-CO1P00395 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
MT-CO1P00395 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.53■□□□□ 0.72
MT-CO1P00395 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
MT-CO1P00395 LINC01568-207ENST00000641790 1380 ntBASIC19.53■□□□□ 0.72
MT-CO1P00395 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.53■□□□□ 0.72
MT-CO1P00395 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
MT-CO1P00395 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
MT-CO1P00395 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
MT-CO1P00395 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
MT-CO1P00395 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
MT-CO1P00395 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
MT-CO1P00395 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC19.53■□□□□ 0.72
MT-CO1P00395 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
MT-CO1P00395 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.52■□□□□ 0.72
MT-CO1P00395 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
MT-CO1P00395 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
MT-CO1P00395 KRT8P11-201ENST00000409686 1436 ntBASIC19.52■□□□□ 0.72
MT-CO1P00395 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
MT-CO1P00395 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
MT-CO1P00395 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
MT-CO1P00395 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
MT-CO1P00395 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
MT-CO1P00395 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
MT-CO1P00395 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
MT-CO1P00395 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
MT-CO1P00395 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC19.52■□□□□ 0.72
MT-CO1P00395 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC19.52■□□□□ 0.72
MT-CO1P00395 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC19.52■□□□□ 0.72
MT-CO1P00395 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
MT-CO1P00395 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC19.52■□□□□ 0.72
MT-CO1P00395 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
MT-CO1P00395 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.52■□□□□ 0.72
MT-CO1P00395 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
MT-CO1P00395 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.52■□□□□ 0.72
MT-CO1P00395 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
MT-CO1P00395 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
MT-CO1P00395 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
MT-CO1P00395 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.52■□□□□ 0.71
MT-CO1P00395 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.71
MT-CO1P00395 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
MT-CO1P00395 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
MT-CO1P00395 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
MT-CO1P00395 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.51■□□□□ 0.71
MT-CO1P00395 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
MT-CO1P00395 INGX-201ENST00000359239 846 ntBASIC19.51■□□□□ 0.71
MT-CO1P00395 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC19.51■□□□□ 0.71
MT-CO1P00395 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC19.51■□□□□ 0.71
MT-CO1P00395 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
MT-CO1P00395 CYGB-204ENST00000589342 815 ntTSL 3 BASIC19.51■□□□□ 0.71
MT-CO1P00395 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC19.51■□□□□ 0.71
MT-CO1P00395 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
MT-CO1P00395 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
MT-CO1P00395 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
MT-CO1P00395 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
MT-CO1P00395 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
MT-CO1P00395 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.51■□□□□ 0.71
MT-CO1P00395 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
MT-CO1P00395 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
MT-CO1P00395 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
MT-CO1P00395 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
MT-CO1P00395 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
MT-CO1P00395 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
MT-CO1P00395 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
MT-CO1P00395 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.5■□□□□ 0.71
MT-CO1P00395 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms