Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
BEST1O76090 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC20.04■□□□□ 0.8
BEST1O76090 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC20.04■□□□□ 0.8
BEST1O76090 AC005521.1-201ENST00000393351 872 ntBASIC20.04■□□□□ 0.8
BEST1O76090 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC20.04■□□□□ 0.8
BEST1O76090 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC20.04■□□□□ 0.8
BEST1O76090 CCR12P-201ENST00000446203 998 ntBASIC20.04■□□□□ 0.8
BEST1O76090 AC128688.1-201ENST00000487626 519 ntBASIC20.04■□□□□ 0.8
BEST1O76090 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC20.04■□□□□ 0.8
BEST1O76090 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
BEST1O76090 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
BEST1O76090 AC005363.2-201ENST00000618631 242 ntBASIC20.04■□□□□ 0.8
BEST1O76090 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC20.04■□□□□ 0.8
BEST1O76090 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
BEST1O76090 FEM1AP3-201ENST00000403722 1741 ntBASIC20.04■□□□□ 0.8
BEST1O76090 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
BEST1O76090 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
BEST1O76090 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC20.04■□□□□ 0.8
BEST1O76090 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
BEST1O76090 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
BEST1O76090 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC20.04■□□□□ 0.8
BEST1O76090 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
BEST1O76090 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
BEST1O76090 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC20.03■□□□□ 0.8
BEST1O76090 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC20.03■□□□□ 0.8
BEST1O76090 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
BEST1O76090 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
BEST1O76090 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
BEST1O76090 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC20.03■□□□□ 0.8
BEST1O76090 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
BEST1O76090 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
BEST1O76090 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
BEST1O76090 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
BEST1O76090 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
BEST1O76090 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC20.03■□□□□ 0.8
BEST1O76090 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
BEST1O76090 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC20.03■□□□□ 0.8
BEST1O76090 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC20.03■□□□□ 0.8
BEST1O76090 TSPY17P-201ENST00000450329 467 ntBASIC20.03■□□□□ 0.8
BEST1O76090 AP003041.3-201ENST00000527151 707 ntBASIC20.03■□□□□ 0.8
BEST1O76090 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC20.03■□□□□ 0.8
BEST1O76090 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
BEST1O76090 UBQLN4P1-201ENST00000461599 1801 ntBASIC20.03■□□□□ 0.8
BEST1O76090 PTGES2-AS1-201ENST00000443493 2100 ntBASIC20.03■□□□□ 0.8
BEST1O76090 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
BEST1O76090 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.03■□□□□ 0.8
BEST1O76090 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
BEST1O76090 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
BEST1O76090 AC073508.3-201ENST00000619697 1419 ntBASIC20.02■□□□□ 0.8
BEST1O76090 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.02■□□□□ 0.8
BEST1O76090 TERF1P1-201ENST00000311003 1181 ntBASIC20.02■□□□□ 0.8
BEST1O76090 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC20.02■□□□□ 0.8
BEST1O76090 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
BEST1O76090 AC113347.1-201ENST00000413321 391 ntBASIC20.02■□□□□ 0.8
BEST1O76090 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
BEST1O76090 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC20.02■□□□□ 0.8
BEST1O76090 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC20.02■□□□□ 0.8
BEST1O76090 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC20.02■□□□□ 0.8
BEST1O76090 CLN6-221ENST00000637494 765 ntTSL 5 BASIC20.02■□□□□ 0.8
BEST1O76090 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
BEST1O76090 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
BEST1O76090 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
BEST1O76090 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
BEST1O76090 AL049812.1-201ENST00000432563 2267 ntBASIC20.02■□□□□ 0.8
BEST1O76090 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.02■□□□□ 0.79
BEST1O76090 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
BEST1O76090 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC20.02■□□□□ 0.79
BEST1O76090 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.02■□□□□ 0.79
BEST1O76090 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.02■□□□□ 0.79
BEST1O76090 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
BEST1O76090 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
BEST1O76090 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC20.02■□□□□ 0.79
BEST1O76090 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC20.02■□□□□ 0.79
BEST1O76090 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
BEST1O76090 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
BEST1O76090 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
BEST1O76090 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
BEST1O76090 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
BEST1O76090 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
BEST1O76090 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
BEST1O76090 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
BEST1O76090 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
BEST1O76090 FAM210CP-201ENST00000445714 574 ntBASIC20.01■□□□□ 0.79
BEST1O76090 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC20.01■□□□□ 0.79
BEST1O76090 MIR4674-201ENST00000582457 87 ntBASIC20.01■□□□□ 0.79
BEST1O76090 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
BEST1O76090 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
BEST1O76090 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC20.01■□□□□ 0.79
BEST1O76090 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
BEST1O76090 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
BEST1O76090 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
BEST1O76090 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC20■□□□□ 0.79
BEST1O76090 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
BEST1O76090 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC20■□□□□ 0.79
BEST1O76090 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC20■□□□□ 0.79
BEST1O76090 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC20■□□□□ 0.79
BEST1O76090 KRT18P57-201ENST00000443599 1254 ntBASIC20■□□□□ 0.79
BEST1O76090 RN7SL850P-201ENST00000579959 291 ntBASIC20■□□□□ 0.79
BEST1O76090 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
BEST1O76090 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms