Protein–RNA interactions for Protein: O75096

LRP4, Low-density lipoprotein receptor-related protein 4, humanhuman

Predictions only

Length 1,905 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRP4O75096 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
LRP4O75096 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.49■□□□□ 0.55
LRP4O75096 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LRP4O75096 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LRP4O75096 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.49■□□□□ 0.55
LRP4O75096 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LRP4O75096 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
LRP4O75096 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
LRP4O75096 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LRP4O75096 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.49■□□□□ 0.55
LRP4O75096 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.49■□□□□ 0.55
LRP4O75096 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.49■□□□□ 0.55
LRP4O75096 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC18.49■□□□□ 0.55
LRP4O75096 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.49■□□□□ 0.55
LRP4O75096 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
LRP4O75096 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.49■□□□□ 0.55
LRP4O75096 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LRP4O75096 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
LRP4O75096 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
LRP4O75096 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LRP4O75096 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LRP4O75096 PCED1CP-201ENST00000419887 785 ntBASIC18.48■□□□□ 0.55
LRP4O75096 HOMER2P1-201ENST00000455653 964 ntBASIC18.48■□□□□ 0.55
LRP4O75096 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRP4O75096 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.48■□□□□ 0.55
LRP4O75096 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.48■□□□□ 0.55
LRP4O75096 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.48■□□□□ 0.55
LRP4O75096 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRP4O75096 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRP4O75096 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRP4O75096 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.48■□□□□ 0.55
LRP4O75096 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
LRP4O75096 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRP4O75096 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRP4O75096 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
LRP4O75096 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
LRP4O75096 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRP4O75096 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.47■□□□□ 0.55
LRP4O75096 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.47■□□□□ 0.55
LRP4O75096 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LRP4O75096 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.47■□□□□ 0.55
LRP4O75096 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC18.47■□□□□ 0.55
LRP4O75096 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.47■□□□□ 0.55
LRP4O75096 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
LRP4O75096 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.47■□□□□ 0.55
LRP4O75096 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRP4O75096 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRP4O75096 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRP4O75096 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.47■□□□□ 0.55
LRP4O75096 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRP4O75096 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LRP4O75096 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.47■□□□□ 0.55
LRP4O75096 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRP4O75096 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRP4O75096 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRP4O75096 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
LRP4O75096 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRP4O75096 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
LRP4O75096 CNP-204ENST00000472031 1019 ntTSL 2 BASIC18.47■□□□□ 0.55
LRP4O75096 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LRP4O75096 CBFB-203ENST00000561924 584 ntTSL 5 BASIC18.47■□□□□ 0.55
LRP4O75096 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.47■□□□□ 0.55
LRP4O75096 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRP4O75096 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRP4O75096 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRP4O75096 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LRP4O75096 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRP4O75096 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LRP4O75096 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.46■□□□□ 0.55
LRP4O75096 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRP4O75096 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LRP4O75096 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LRP4O75096 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LRP4O75096 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.46■□□□□ 0.55
LRP4O75096 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.46■□□□□ 0.55
LRP4O75096 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC18.46■□□□□ 0.55
LRP4O75096 CLN6-204ENST00000564752 900 ntTSL 3 BASIC18.46■□□□□ 0.55
LRP4O75096 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.46■□□□□ 0.55
LRP4O75096 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LRP4O75096 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
LRP4O75096 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRP4O75096 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
LRP4O75096 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LRP4O75096 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRP4O75096 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.46■□□□□ 0.54
LRP4O75096 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRP4O75096 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
LRP4O75096 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC18.45■□□□□ 0.54
LRP4O75096 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LRP4O75096 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRP4O75096 MCCD1P1-208ENST00000445732 328 ntBASIC18.45■□□□□ 0.54
LRP4O75096 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LRP4O75096 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC18.45■□□□□ 0.54
LRP4O75096 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.45■□□□□ 0.54
LRP4O75096 USF2-205ENST00000594064 1179 ntTSL 2 BASIC18.45■□□□□ 0.54
LRP4O75096 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.45■□□□□ 0.54
LRP4O75096 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.45■□□□□ 0.54
LRP4O75096 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRP4O75096 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
LRP4O75096 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms