Protein–RNA interactions for Protein: O15439

ABCC4, Multidrug resistance-associated protein 4, humanhuman

Predictions only

Length 1,325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC4O15439 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC24.3■■□□□ 1.48
ABCC4O15439 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
ABCC4O15439 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC24.3■■□□□ 1.48
ABCC4O15439 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
ABCC4O15439 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
ABCC4O15439 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
ABCC4O15439 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC24.3■■□□□ 1.48
ABCC4O15439 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC24.3■■□□□ 1.48
ABCC4O15439 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC24.3■■□□□ 1.48
ABCC4O15439 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
ABCC4O15439 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC24.3■■□□□ 1.48
ABCC4O15439 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
ABCC4O15439 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
ABCC4O15439 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
ABCC4O15439 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC24.3■■□□□ 1.48
ABCC4O15439 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
ABCC4O15439 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
ABCC4O15439 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
ABCC4O15439 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC24.3■■□□□ 1.48
ABCC4O15439 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC24.3■■□□□ 1.48
ABCC4O15439 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
ABCC4O15439 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
ABCC4O15439 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC24.29■■□□□ 1.48
ABCC4O15439 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
ABCC4O15439 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
ABCC4O15439 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
ABCC4O15439 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
ABCC4O15439 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC24.29■■□□□ 1.48
ABCC4O15439 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC24.29■■□□□ 1.48
ABCC4O15439 KRT8P11-201ENST00000409686 1436 ntBASIC24.29■■□□□ 1.48
ABCC4O15439 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC24.29■■□□□ 1.48
ABCC4O15439 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
ABCC4O15439 AC004951.3-201ENST00000418645 1148 ntBASIC24.29■■□□□ 1.48
ABCC4O15439 AC128688.1-201ENST00000487626 519 ntBASIC24.29■■□□□ 1.48
ABCC4O15439 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC24.29■■□□□ 1.48
ABCC4O15439 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
ABCC4O15439 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC24.29■■□□□ 1.48
ABCC4O15439 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
ABCC4O15439 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
ABCC4O15439 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC24.29■■□□□ 1.48
ABCC4O15439 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC24.28■■□□□ 1.48
ABCC4O15439 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC24.28■■□□□ 1.48
ABCC4O15439 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
ABCC4O15439 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC24.28■■□□□ 1.48
ABCC4O15439 AL049812.1-201ENST00000432563 2267 ntBASIC24.28■■□□□ 1.48
ABCC4O15439 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
ABCC4O15439 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
ABCC4O15439 GUK1-204ENST00000366721 689 ntTSL 3 BASIC24.28■■□□□ 1.48
ABCC4O15439 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC24.28■■□□□ 1.48
ABCC4O15439 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC24.28■■□□□ 1.48
ABCC4O15439 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC24.28■■□□□ 1.48
ABCC4O15439 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
ABCC4O15439 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC24.28■■□□□ 1.48
ABCC4O15439 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
ABCC4O15439 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC24.28■■□□□ 1.48
ABCC4O15439 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC24.27■■□□□ 1.48
ABCC4O15439 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
ABCC4O15439 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
ABCC4O15439 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC24.27■■□□□ 1.48
ABCC4O15439 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
ABCC4O15439 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC24.27■■□□□ 1.48
ABCC4O15439 FP475955.4-201ENST00000623131 1990 ntBASIC24.27■■□□□ 1.48
ABCC4O15439 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
ABCC4O15439 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC24.27■■□□□ 1.48
ABCC4O15439 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
ABCC4O15439 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC24.27■■□□□ 1.48
ABCC4O15439 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
ABCC4O15439 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
ABCC4O15439 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC24.27■■□□□ 1.47
ABCC4O15439 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC24.27■■□□□ 1.47
ABCC4O15439 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC24.26■■□□□ 1.47
ABCC4O15439 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC24.26■■□□□ 1.47
ABCC4O15439 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
ABCC4O15439 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC24.26■■□□□ 1.47
ABCC4O15439 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
ABCC4O15439 AC096733.2-201ENST00000609937 1394 ntBASIC24.26■■□□□ 1.47
ABCC4O15439 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
ABCC4O15439 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC24.26■■□□□ 1.47
ABCC4O15439 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
ABCC4O15439 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
ABCC4O15439 HIST1H2APS4-201ENST00000362070 348 ntBASIC24.26■■□□□ 1.47
ABCC4O15439 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC24.26■■□□□ 1.47
ABCC4O15439 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC24.26■■□□□ 1.47
ABCC4O15439 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC24.26■■□□□ 1.47
ABCC4O15439 DERL1-203ENST00000419562 918 ntTSL 2 BASIC24.26■■□□□ 1.47
ABCC4O15439 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC24.26■■□□□ 1.47
ABCC4O15439 MFAP1P1-201ENST00000442257 1255 ntBASIC24.26■■□□□ 1.47
ABCC4O15439 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC24.26■■□□□ 1.47
ABCC4O15439 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
ABCC4O15439 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC24.26■■□□□ 1.47
ABCC4O15439 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
ABCC4O15439 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC24.26■■□□□ 1.47
ABCC4O15439 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC24.26■■□□□ 1.47
ABCC4O15439 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
ABCC4O15439 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC24.26■■□□□ 1.47
ABCC4O15439 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC24.26■■□□□ 1.47
ABCC4O15439 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC24.25■■□□□ 1.47
ABCC4O15439 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC24.25■■□□□ 1.47
ABCC4O15439 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC24.25■■□□□ 1.47
ABCC4O15439 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC24.25■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms