Protein–RNA interactions for Protein: O15269

SPTLC1, Serine palmitoyltransferase 1, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1O15269 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SPTLC1O15269 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
SPTLC1O15269 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC20.42■□□□□ 0.86
SPTLC1O15269 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SPTLC1O15269 TSPY17P-201ENST00000450329 467 ntBASIC20.42■□□□□ 0.86
SPTLC1O15269 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
SPTLC1O15269 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC20.42■□□□□ 0.86
SPTLC1O15269 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
SPTLC1O15269 AC007952.6-201ENST00000573168 2673 ntBASIC20.42■□□□□ 0.86
SPTLC1O15269 AC003957.1-201ENST00000625108 2673 ntBASIC20.42■□□□□ 0.86
SPTLC1O15269 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.42■□□□□ 0.86
SPTLC1O15269 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SPTLC1O15269 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SPTLC1O15269 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
SPTLC1O15269 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.42■□□□□ 0.86
SPTLC1O15269 TBC1D3P2-202ENST00000577902 1649 ntBASIC20.42■□□□□ 0.86
SPTLC1O15269 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SPTLC1O15269 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SPTLC1O15269 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SPTLC1O15269 AC093484.2-201ENST00000580996 2166 ntBASIC20.41■□□□□ 0.86
SPTLC1O15269 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SPTLC1O15269 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC20.41■□□□□ 0.86
SPTLC1O15269 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
SPTLC1O15269 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC20.41■□□□□ 0.86
SPTLC1O15269 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC20.41■□□□□ 0.86
SPTLC1O15269 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SPTLC1O15269 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC20.41■□□□□ 0.86
SPTLC1O15269 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC20.41■□□□□ 0.86
SPTLC1O15269 AP003041.3-201ENST00000527151 707 ntBASIC20.41■□□□□ 0.86
SPTLC1O15269 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC20.41■□□□□ 0.86
SPTLC1O15269 AC010653.2-201ENST00000623505 997 ntBASIC20.41■□□□□ 0.86
SPTLC1O15269 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
SPTLC1O15269 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SPTLC1O15269 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SPTLC1O15269 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SPTLC1O15269 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.41■□□□□ 0.86
SPTLC1O15269 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SPTLC1O15269 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SPTLC1O15269 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.4■□□□□ 0.86
SPTLC1O15269 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SPTLC1O15269 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SPTLC1O15269 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
SPTLC1O15269 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
SPTLC1O15269 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SPTLC1O15269 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
SPTLC1O15269 HMGA1P5-201ENST00000412453 271 ntBASIC20.4■□□□□ 0.86
SPTLC1O15269 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SPTLC1O15269 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC20.4■□□□□ 0.86
SPTLC1O15269 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
SPTLC1O15269 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC20.4■□□□□ 0.86
SPTLC1O15269 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SPTLC1O15269 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC20.4■□□□□ 0.86
SPTLC1O15269 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC20.4■□□□□ 0.86
SPTLC1O15269 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SPTLC1O15269 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
SPTLC1O15269 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
SPTLC1O15269 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
SPTLC1O15269 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SPTLC1O15269 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SPTLC1O15269 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SPTLC1O15269 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
SPTLC1O15269 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.39■□□□□ 0.86
SPTLC1O15269 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC20.39■□□□□ 0.86
SPTLC1O15269 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
SPTLC1O15269 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
SPTLC1O15269 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC20.39■□□□□ 0.86
SPTLC1O15269 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
SPTLC1O15269 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SPTLC1O15269 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
SPTLC1O15269 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SPTLC1O15269 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SPTLC1O15269 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC20.39■□□□□ 0.85
SPTLC1O15269 AC104076.2-201ENST00000448912 469 ntBASIC20.39■□□□□ 0.85
SPTLC1O15269 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC20.39■□□□□ 0.85
SPTLC1O15269 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC20.39■□□□□ 0.85
SPTLC1O15269 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
SPTLC1O15269 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SPTLC1O15269 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
SPTLC1O15269 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SPTLC1O15269 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SPTLC1O15269 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC20.39■□□□□ 0.85
SPTLC1O15269 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
SPTLC1O15269 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
SPTLC1O15269 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
SPTLC1O15269 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SPTLC1O15269 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.38■□□□□ 0.85
SPTLC1O15269 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SPTLC1O15269 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SPTLC1O15269 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC20.38■□□□□ 0.85
SPTLC1O15269 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SPTLC1O15269 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
SPTLC1O15269 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SPTLC1O15269 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
SPTLC1O15269 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SPTLC1O15269 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC20.38■□□□□ 0.85
SPTLC1O15269 AC008622.2-201ENST00000617006 1229 ntBASIC20.38■□□□□ 0.85
SPTLC1O15269 AL138966.2-201ENST00000621997 464 ntBASIC20.38■□□□□ 0.85
SPTLC1O15269 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SPTLC1O15269 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SPTLC1O15269 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms