Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC26.59■■□□□ 1.85
CHD2O14647 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC26.59■■□□□ 1.85
CHD2O14647 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC26.59■■□□□ 1.85
CHD2O14647 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC26.59■■□□□ 1.85
CHD2O14647 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC26.59■■□□□ 1.85
CHD2O14647 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC26.59■■□□□ 1.85
CHD2O14647 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
CHD2O14647 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
CHD2O14647 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC26.59■■□□□ 1.85
CHD2O14647 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC26.59■■□□□ 1.85
CHD2O14647 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC26.59■■□□□ 1.85
CHD2O14647 CDV3-207ENST00000508481 661 ntTSL 3 BASIC26.58■■□□□ 1.85
CHD2O14647 AF238378.1-201ENST00000526806 358 ntBASIC26.58■■□□□ 1.85
CHD2O14647 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC26.58■■□□□ 1.85
CHD2O14647 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC26.58■■□□□ 1.85
CHD2O14647 ME2-216ENST00000639850 2331 ntTSL 5 BASIC26.58■■□□□ 1.85
CHD2O14647 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC26.58■■□□□ 1.84
CHD2O14647 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC26.58■■□□□ 1.84
CHD2O14647 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.84
CHD2O14647 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
CHD2O14647 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC26.57■■□□□ 1.84
CHD2O14647 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
CHD2O14647 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC26.57■■□□□ 1.84
CHD2O14647 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
CHD2O14647 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC26.57■■□□□ 1.84
CHD2O14647 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
CHD2O14647 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
CHD2O14647 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC26.57■■□□□ 1.84
CHD2O14647 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
CHD2O14647 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
CHD2O14647 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC26.57■■□□□ 1.84
CHD2O14647 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC26.57■■□□□ 1.84
CHD2O14647 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC26.57■■□□□ 1.84
CHD2O14647 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC26.57■■□□□ 1.84
CHD2O14647 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC26.57■■□□□ 1.84
CHD2O14647 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC26.57■■□□□ 1.84
CHD2O14647 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC26.57■■□□□ 1.84
CHD2O14647 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
CHD2O14647 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
CHD2O14647 AC026310.3-201ENST00000625186 2373 ntBASIC26.57■■□□□ 1.84
CHD2O14647 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
CHD2O14647 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC26.56■■□□□ 1.84
CHD2O14647 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC26.56■■□□□ 1.84
CHD2O14647 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC26.56■■□□□ 1.84
CHD2O14647 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
CHD2O14647 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC26.56■■□□□ 1.84
CHD2O14647 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
CHD2O14647 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
CHD2O14647 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC26.56■■□□□ 1.84
CHD2O14647 AL590627.1-203ENST00000421194 1026 ntBASIC26.56■■□□□ 1.84
CHD2O14647 RPP21-221ENST00000428040 594 ntTSL 2 BASIC26.56■■□□□ 1.84
CHD2O14647 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
CHD2O14647 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
CHD2O14647 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC26.56■■□□□ 1.84
CHD2O14647 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC26.56■■□□□ 1.84
CHD2O14647 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC26.56■■□□□ 1.84
CHD2O14647 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
CHD2O14647 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC26.56■■□□□ 1.84
CHD2O14647 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC26.56■■□□□ 1.84
CHD2O14647 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
CHD2O14647 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
CHD2O14647 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC26.56■■□□□ 1.84
CHD2O14647 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
CHD2O14647 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC26.55■■□□□ 1.84
CHD2O14647 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC26.55■■□□□ 1.84
CHD2O14647 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC26.55■■□□□ 1.84
CHD2O14647 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC26.55■■□□□ 1.84
CHD2O14647 AC112497.1-201ENST00000624824 639 ntBASIC26.55■■□□□ 1.84
CHD2O14647 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC26.55■■□□□ 1.84
CHD2O14647 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC26.55■■□□□ 1.84
CHD2O14647 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CHD2O14647 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC26.55■■□□□ 1.84
CHD2O14647 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC26.55■■□□□ 1.84
CHD2O14647 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC26.55■■□□□ 1.84
CHD2O14647 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC26.55■■□□□ 1.84
CHD2O14647 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC26.55■■□□□ 1.84
CHD2O14647 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC26.55■■□□□ 1.84
CHD2O14647 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CHD2O14647 AL592071.1-201ENST00000611956 408 ntBASIC26.55■■□□□ 1.84
CHD2O14647 MIR7706-201ENST00000613747 67 ntBASIC26.55■■□□□ 1.84
CHD2O14647 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CHD2O14647 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC26.55■■□□□ 1.84
CHD2O14647 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC26.54■■□□□ 1.84
CHD2O14647 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
CHD2O14647 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC26.54■■□□□ 1.84
CHD2O14647 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
CHD2O14647 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC26.54■■□□□ 1.84
CHD2O14647 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
CHD2O14647 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC26.54■■□□□ 1.84
CHD2O14647 Z69720.1-201ENST00000601483 472 ntBASIC26.54■■□□□ 1.84
CHD2O14647 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC26.54■■□□□ 1.84
CHD2O14647 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC26.54■■□□□ 1.84
CHD2O14647 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
CHD2O14647 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC26.54■■□□□ 1.84
CHD2O14647 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
CHD2O14647 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
CHD2O14647 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC26.54■■□□□ 1.84
CHD2O14647 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
CHD2O14647 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
CHD2O14647 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC26.53■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms