Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
UPK2O00526 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC15.32■□□□□ 0.04
UPK2O00526 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC15.31■□□□□ 0.04
UPK2O00526 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC15.31■□□□□ 0.04
UPK2O00526 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
UPK2O00526 AL512353.2-201ENST00000448759 1962 ntBASIC15.31■□□□□ 0.04
UPK2O00526 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
UPK2O00526 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
UPK2O00526 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
UPK2O00526 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
UPK2O00526 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
UPK2O00526 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC15.31■□□□□ 0.04
UPK2O00526 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
UPK2O00526 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
UPK2O00526 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC15.31■□□□□ 0.04
UPK2O00526 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
UPK2O00526 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
UPK2O00526 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
UPK2O00526 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC15.31■□□□□ 0.04
UPK2O00526 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC15.31■□□□□ 0.04
UPK2O00526 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC15.31■□□□□ 0.04
UPK2O00526 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
UPK2O00526 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
UPK2O00526 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
UPK2O00526 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
UPK2O00526 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
UPK2O00526 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC15.31■□□□□ 0.04
UPK2O00526 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
UPK2O00526 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
UPK2O00526 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC15.31■□□□□ 0.04
UPK2O00526 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
UPK2O00526 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC15.31■□□□□ 0.04
UPK2O00526 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
UPK2O00526 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
UPK2O00526 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
UPK2O00526 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
UPK2O00526 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
UPK2O00526 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
UPK2O00526 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
UPK2O00526 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
UPK2O00526 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC15.3■□□□□ 0.04
UPK2O00526 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC15.3■□□□□ 0.04
UPK2O00526 NEFHP1-201ENST00000412845 2629 ntBASIC15.3■□□□□ 0.04
UPK2O00526 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
UPK2O00526 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC15.3■□□□□ 0.04
UPK2O00526 AC090192.1-201ENST00000517740 490 ntBASIC15.3■□□□□ 0.04
UPK2O00526 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
UPK2O00526 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
UPK2O00526 C1QL1P1-201ENST00000568105 661 ntBASIC15.3■□□□□ 0.04
UPK2O00526 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
UPK2O00526 AC008403.3-201ENST00000598924 454 ntBASIC15.3■□□□□ 0.04
UPK2O00526 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
UPK2O00526 HLA-A-209ENST00000638375 975 ntBASIC15.3■□□□□ 0.04
UPK2O00526 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
UPK2O00526 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
UPK2O00526 USP49-202ENST00000373010 2446 ntTSL 5 BASIC15.29■□□□□ 0.04
UPK2O00526 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC15.29■□□□□ 0.04
UPK2O00526 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
UPK2O00526 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
UPK2O00526 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
UPK2O00526 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
UPK2O00526 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
UPK2O00526 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
UPK2O00526 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
UPK2O00526 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
UPK2O00526 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
UPK2O00526 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
UPK2O00526 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
UPK2O00526 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
UPK2O00526 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
UPK2O00526 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
UPK2O00526 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
UPK2O00526 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
UPK2O00526 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
UPK2O00526 AL355802.2-201ENST00000402069 882 ntBASIC15.29■□□□□ 0.04
UPK2O00526 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
UPK2O00526 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
UPK2O00526 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
UPK2O00526 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
UPK2O00526 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
UPK2O00526 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC15.29■□□□□ 0.04
UPK2O00526 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC15.29■□□□□ 0.04
UPK2O00526 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
UPK2O00526 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC15.29■□□□□ 0.04
UPK2O00526 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC15.29■□□□□ 0.04
UPK2O00526 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
UPK2O00526 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC15.29■□□□□ 0.04
UPK2O00526 AC083906.6-201ENST00000641366 219 ntBASIC15.29■□□□□ 0.04
UPK2O00526 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
UPK2O00526 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
UPK2O00526 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
UPK2O00526 WIZP1-201ENST00000531444 2299 ntBASIC15.29■□□□□ 0.04
UPK2O00526 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
UPK2O00526 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
UPK2O00526 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
UPK2O00526 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC15.29■□□□□ 0.04
UPK2O00526 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
UPK2O00526 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
UPK2O00526 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC15.29■□□□□ 0.04
UPK2O00526 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms