Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC188H7C350 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
CCDC188H7C350 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC188H7C350 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19.85■□□□□ 0.77
CCDC188H7C350 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
CCDC188H7C350 KRT18P16-201ENST00000510337 1294 ntBASIC19.85■□□□□ 0.77
CCDC188H7C350 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.85■□□□□ 0.77
CCDC188H7C350 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC19.85■□□□□ 0.77
CCDC188H7C350 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC188H7C350 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.85■□□□□ 0.77
CCDC188H7C350 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC188H7C350 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC188H7C350 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
CCDC188H7C350 MKRN4P-201ENST00000444706 1521 ntBASIC19.85■□□□□ 0.77
CCDC188H7C350 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC188H7C350 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC188H7C350 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC188H7C350 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC188H7C350 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC188H7C350 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
CCDC188H7C350 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC188H7C350 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC188H7C350 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC188H7C350 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.84■□□□□ 0.77
CCDC188H7C350 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
CCDC188H7C350 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC188H7C350 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
CCDC188H7C350 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC188H7C350 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
CCDC188H7C350 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC19.84■□□□□ 0.77
CCDC188H7C350 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.84■□□□□ 0.77
CCDC188H7C350 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.84■□□□□ 0.77
CCDC188H7C350 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.84■□□□□ 0.77
CCDC188H7C350 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC19.84■□□□□ 0.77
CCDC188H7C350 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.84■□□□□ 0.77
CCDC188H7C350 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC188H7C350 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC188H7C350 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC188H7C350 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC188H7C350 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC188H7C350 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC188H7C350 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC188H7C350 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC188H7C350 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC188H7C350 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC188H7C350 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC19.84■□□□□ 0.77
CCDC188H7C350 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC188H7C350 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC188H7C350 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC188H7C350 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC188H7C350 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
CCDC188H7C350 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.77
CCDC188H7C350 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC188H7C350 AL162741.1-201ENST00000565563 1558 ntBASIC19.83■□□□□ 0.77
CCDC188H7C350 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC188H7C350 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC188H7C350 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC188H7C350 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC188H7C350 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.83■□□□□ 0.77
CCDC188H7C350 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC19.83■□□□□ 0.77
CCDC188H7C350 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC188H7C350 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC188H7C350 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC188H7C350 AC006557.6-201ENST00000623071 864 ntBASIC19.83■□□□□ 0.77
CCDC188H7C350 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC188H7C350 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC188H7C350 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.76
CCDC188H7C350 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
CCDC188H7C350 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC188H7C350 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC188H7C350 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
CCDC188H7C350 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
CCDC188H7C350 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC188H7C350 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC188H7C350 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC188H7C350 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC188H7C350 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.82■□□□□ 0.76
CCDC188H7C350 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC188H7C350 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC188H7C350 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC188H7C350 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC188H7C350 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC188H7C350 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC188H7C350 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC188H7C350 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC19.82■□□□□ 0.76
CCDC188H7C350 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.82■□□□□ 0.76
CCDC188H7C350 BX276092.2-201ENST00000417668 665 ntBASIC19.82■□□□□ 0.76
CCDC188H7C350 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.82■□□□□ 0.76
CCDC188H7C350 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.82■□□□□ 0.76
CCDC188H7C350 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.82■□□□□ 0.76
CCDC188H7C350 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
CCDC188H7C350 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC188H7C350 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC188H7C350 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC188H7C350 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC188H7C350 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
CCDC188H7C350 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC188H7C350 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
CCDC188H7C350 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC188H7C350 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms