Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
RNF223E7ERA6 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC15.82■□□□□ 0.12
RNF223E7ERA6 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RNF223E7ERA6 SKP2-204ENST00000508514 821 ntTSL 3 BASIC15.82■□□□□ 0.12
RNF223E7ERA6 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC15.82■□□□□ 0.12
RNF223E7ERA6 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC15.82■□□□□ 0.12
RNF223E7ERA6 AC011498.5-201ENST00000592027 486 ntBASIC15.82■□□□□ 0.12
RNF223E7ERA6 AL121672.3-201ENST00000608644 468 ntBASIC15.82■□□□□ 0.12
RNF223E7ERA6 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RNF223E7ERA6 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RNF223E7ERA6 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RNF223E7ERA6 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RNF223E7ERA6 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC15.82■□□□□ 0.12
RNF223E7ERA6 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RNF223E7ERA6 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC15.82■□□□□ 0.12
RNF223E7ERA6 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RNF223E7ERA6 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
RNF223E7ERA6 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RNF223E7ERA6 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
RNF223E7ERA6 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
RNF223E7ERA6 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
RNF223E7ERA6 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RNF223E7ERA6 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF223E7ERA6 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF223E7ERA6 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
RNF223E7ERA6 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF223E7ERA6 PPIH-202ENST00000372549 327 ntTSL 3 BASIC15.81■□□□□ 0.12
RNF223E7ERA6 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF223E7ERA6 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
RNF223E7ERA6 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC15.81■□□□□ 0.12
RNF223E7ERA6 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC15.81■□□□□ 0.12
RNF223E7ERA6 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RNF223E7ERA6 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RNF223E7ERA6 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF223E7ERA6 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC15.81■□□□□ 0.12
RNF223E7ERA6 AC024243.1-201ENST00000609234 778 ntBASIC15.81■□□□□ 0.12
RNF223E7ERA6 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF223E7ERA6 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC15.81■□□□□ 0.12
RNF223E7ERA6 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
RNF223E7ERA6 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC15.81■□□□□ 0.12
RNF223E7ERA6 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF223E7ERA6 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RNF223E7ERA6 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF223E7ERA6 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF223E7ERA6 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
RNF223E7ERA6 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC15.8■□□□□ 0.12
RNF223E7ERA6 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF223E7ERA6 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC15.8■□□□□ 0.12
RNF223E7ERA6 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RNF223E7ERA6 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC15.8■□□□□ 0.12
RNF223E7ERA6 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC15.8■□□□□ 0.12
RNF223E7ERA6 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC15.8■□□□□ 0.12
RNF223E7ERA6 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RNF223E7ERA6 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF223E7ERA6 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF223E7ERA6 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RNF223E7ERA6 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF223E7ERA6 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF223E7ERA6 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF223E7ERA6 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
RNF223E7ERA6 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC15.8■□□□□ 0.12
RNF223E7ERA6 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC15.8■□□□□ 0.12
RNF223E7ERA6 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC15.8■□□□□ 0.12
RNF223E7ERA6 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC15.8■□□□□ 0.12
RNF223E7ERA6 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF223E7ERA6 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC15.8■□□□□ 0.12
RNF223E7ERA6 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF223E7ERA6 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF223E7ERA6 AC020907.5-201ENST00000624372 1936 ntBASIC15.8■□□□□ 0.12
RNF223E7ERA6 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF223E7ERA6 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC15.8■□□□□ 0.12
RNF223E7ERA6 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
RNF223E7ERA6 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RNF223E7ERA6 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
RNF223E7ERA6 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RNF223E7ERA6 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC15.79■□□□□ 0.12
RNF223E7ERA6 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC15.79■□□□□ 0.12
RNF223E7ERA6 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RNF223E7ERA6 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC15.79■□□□□ 0.12
RNF223E7ERA6 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC15.79■□□□□ 0.12
RNF223E7ERA6 AL691432.2-201ENST00000607222 2038 ntBASIC15.79■□□□□ 0.12
RNF223E7ERA6 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RNF223E7ERA6 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RNF223E7ERA6 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RNF223E7ERA6 AC091917.2-201ENST00000505002 744 ntBASIC15.79■□□□□ 0.12
RNF223E7ERA6 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC15.79■□□□□ 0.12
RNF223E7ERA6 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC15.79■□□□□ 0.12
RNF223E7ERA6 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
RNF223E7ERA6 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
RNF223E7ERA6 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RNF223E7ERA6 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC15.79■□□□□ 0.12
RNF223E7ERA6 TMEM14EP-202ENST00000639378 1296 ntBASIC15.79■□□□□ 0.12
RNF223E7ERA6 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
RNF223E7ERA6 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC15.79■□□□□ 0.12
RNF223E7ERA6 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC15.79■□□□□ 0.12
RNF223E7ERA6 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC15.79■□□□□ 0.12
RNF223E7ERA6 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC15.79■□□□□ 0.12
RNF223E7ERA6 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RNF223E7ERA6 MED17-221ENST00000639724 2317 ntTSL 5 BASIC15.79■□□□□ 0.12
RNF223E7ERA6 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms