Protein–RNA interactions for Protein: A0A1W2PRF3

Uncharacterized protein, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A0A1W2PRF3 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
A0A1W2PRF3 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC15.69■□□□□ 0.1
A0A1W2PRF3 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
A0A1W2PRF3 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
A0A1W2PRF3 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
A0A1W2PRF3 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC15.69■□□□□ 0.1
A0A1W2PRF3 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
A0A1W2PRF3 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
A0A1W2PRF3 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
A0A1W2PRF3 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
A0A1W2PRF3 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
A0A1W2PRF3 FAM207BP-201ENST00000447172 505 ntBASIC15.69■□□□□ 0.1
A0A1W2PRF3 Z85996.1-201ENST00000494644 937 ntBASIC15.69■□□□□ 0.1
A0A1W2PRF3 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC15.69■□□□□ 0.1
A0A1W2PRF3 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC15.69■□□□□ 0.1
A0A1W2PRF3 AC026271.3-201ENST00000571884 352 ntBASIC15.69■□□□□ 0.1
A0A1W2PRF3 CYGB-204ENST00000589342 815 ntTSL 3 BASIC15.69■□□□□ 0.1
A0A1W2PRF3 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
A0A1W2PRF3 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC15.69■□□□□ 0.1
A0A1W2PRF3 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
A0A1W2PRF3 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
A0A1W2PRF3 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
A0A1W2PRF3 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
A0A1W2PRF3 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
A0A1W2PRF3 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC15.68■□□□□ 0.1
A0A1W2PRF3 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
A0A1W2PRF3 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
A0A1W2PRF3 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC15.68■□□□□ 0.1
A0A1W2PRF3 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
A0A1W2PRF3 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
A0A1W2PRF3 CYP2D8P-201ENST00000433633 1490 ntBASIC15.68■□□□□ 0.1
A0A1W2PRF3 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
A0A1W2PRF3 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
A0A1W2PRF3 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC15.68■□□□□ 0.1
A0A1W2PRF3 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC15.68■□□□□ 0.1
A0A1W2PRF3 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC15.68■□□□□ 0.1
A0A1W2PRF3 PTPA-216ENST00000432651 857 ntTSL 2 BASIC15.68■□□□□ 0.1
A0A1W2PRF3 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
A0A1W2PRF3 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC15.68■□□□□ 0.1
A0A1W2PRF3 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC15.68■□□□□ 0.1
A0A1W2PRF3 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC15.68■□□□□ 0.1
A0A1W2PRF3 GRAMD4P8-201ENST00000605465 1115 ntBASIC15.68■□□□□ 0.1
A0A1W2PRF3 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
A0A1W2PRF3 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
A0A1W2PRF3 AC130371.2-201ENST00000619443 611 ntBASIC15.68■□□□□ 0.1
A0A1W2PRF3 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
A0A1W2PRF3 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
A0A1W2PRF3 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
A0A1W2PRF3 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
A0A1W2PRF3 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
A0A1W2PRF3 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
A0A1W2PRF3 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
A0A1W2PRF3 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
A0A1W2PRF3 ZNF815P-204ENST00000434898 1737 ntBASIC15.68■□□□□ 0.1
A0A1W2PRF3 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
A0A1W2PRF3 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
A0A1W2PRF3 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
A0A1W2PRF3 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
A0A1W2PRF3 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
A0A1W2PRF3 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
A0A1W2PRF3 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC15.67■□□□□ 0.1
A0A1W2PRF3 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
A0A1W2PRF3 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
A0A1W2PRF3 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
A0A1W2PRF3 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC15.67■□□□□ 0.1
A0A1W2PRF3 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
A0A1W2PRF3 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
A0A1W2PRF3 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
A0A1W2PRF3 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
A0A1W2PRF3 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
A0A1W2PRF3 SDHAP1-207ENST00000440850 2000 ntBASIC15.67■□□□□ 0.1
A0A1W2PRF3 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
A0A1W2PRF3 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
A0A1W2PRF3 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
A0A1W2PRF3 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
A0A1W2PRF3 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
A0A1W2PRF3 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC15.67■□□□□ 0.1
A0A1W2PRF3 DERL1-203ENST00000419562 918 ntTSL 2 BASIC15.67■□□□□ 0.1
A0A1W2PRF3 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC15.67■□□□□ 0.1
A0A1W2PRF3 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC15.67■□□□□ 0.1
A0A1W2PRF3 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC15.67■□□□□ 0.1
A0A1W2PRF3 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC15.67■□□□□ 0.1
A0A1W2PRF3 LINC01023-201ENST00000606054 436 ntBASIC15.67■□□□□ 0.1
A0A1W2PRF3 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC15.67■□□□□ 0.1
A0A1W2PRF3 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
A0A1W2PRF3 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
A0A1W2PRF3 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
A0A1W2PRF3 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
A0A1W2PRF3 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC15.67■□□□□ 0.1
A0A1W2PRF3 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
A0A1W2PRF3 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC15.67■□□□□ 0.1
A0A1W2PRF3 AC090340.1-201ENST00000620778 4980 ntBASIC15.67■□□□□ 0.1
A0A1W2PRF3 TREX1-205ENST00000625293 1783 ntBASIC15.67■□□□□ 0.1
A0A1W2PRF3 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC15.67■□□□□ 0.1
A0A1W2PRF3 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
A0A1W2PRF3 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
A0A1W2PRF3 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
A0A1W2PRF3 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
A0A1W2PRF3 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
A0A1W2PRF3 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 10.5 ms