Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC22.22■■□□□ 1.15
CCDC196A0A1B0GTZ2 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC22.21■■□□□ 1.15
CCDC196A0A1B0GTZ2 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
CCDC196A0A1B0GTZ2 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
CCDC196A0A1B0GTZ2 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CCDC196A0A1B0GTZ2 AC008040.2-201ENST00000461049 708 ntBASIC22.21■■□□□ 1.15
CCDC196A0A1B0GTZ2 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CCDC196A0A1B0GTZ2 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC22.21■■□□□ 1.15
CCDC196A0A1B0GTZ2 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC22.21■■□□□ 1.15
CCDC196A0A1B0GTZ2 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC22.21■■□□□ 1.15
CCDC196A0A1B0GTZ2 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC22.21■■□□□ 1.15
CCDC196A0A1B0GTZ2 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CCDC196A0A1B0GTZ2 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
CCDC196A0A1B0GTZ2 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CCDC196A0A1B0GTZ2 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CCDC196A0A1B0GTZ2 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
CCDC196A0A1B0GTZ2 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CCDC196A0A1B0GTZ2 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
CCDC196A0A1B0GTZ2 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
CCDC196A0A1B0GTZ2 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC22.2■■□□□ 1.14
CCDC196A0A1B0GTZ2 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC22.2■■□□□ 1.14
CCDC196A0A1B0GTZ2 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
CCDC196A0A1B0GTZ2 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
CCDC196A0A1B0GTZ2 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC22.2■■□□□ 1.14
CCDC196A0A1B0GTZ2 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
CCDC196A0A1B0GTZ2 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
CCDC196A0A1B0GTZ2 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
CCDC196A0A1B0GTZ2 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC22.2■■□□□ 1.14
CCDC196A0A1B0GTZ2 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
CCDC196A0A1B0GTZ2 DET1-205ENST00000558413 583 ntTSL 4 BASIC22.2■■□□□ 1.14
CCDC196A0A1B0GTZ2 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC22.2■■□□□ 1.14
CCDC196A0A1B0GTZ2 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC22.2■■□□□ 1.14
CCDC196A0A1B0GTZ2 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC22.2■■□□□ 1.14
CCDC196A0A1B0GTZ2 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC22.2■■□□□ 1.14
CCDC196A0A1B0GTZ2 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
CCDC196A0A1B0GTZ2 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC22.2■■□□□ 1.14
CCDC196A0A1B0GTZ2 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CCDC196A0A1B0GTZ2 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CCDC196A0A1B0GTZ2 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CCDC196A0A1B0GTZ2 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
CCDC196A0A1B0GTZ2 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CCDC196A0A1B0GTZ2 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC22.2■■□□□ 1.14
CCDC196A0A1B0GTZ2 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
CCDC196A0A1B0GTZ2 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CCDC196A0A1B0GTZ2 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC22.2■■□□□ 1.14
CCDC196A0A1B0GTZ2 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC22.2■■□□□ 1.14
CCDC196A0A1B0GTZ2 AC018445.3-201ENST00000624177 1945 ntBASIC22.19■■□□□ 1.14
CCDC196A0A1B0GTZ2 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CCDC196A0A1B0GTZ2 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
CCDC196A0A1B0GTZ2 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
CCDC196A0A1B0GTZ2 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CCDC196A0A1B0GTZ2 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
CCDC196A0A1B0GTZ2 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
CCDC196A0A1B0GTZ2 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC22.19■■□□□ 1.14
CCDC196A0A1B0GTZ2 DHDH-203ENST00000522614 776 ntTSL 5 BASIC22.19■■□□□ 1.14
CCDC196A0A1B0GTZ2 AP003071.4-201ENST00000562276 1284 ntBASIC22.19■■□□□ 1.14
CCDC196A0A1B0GTZ2 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC22.19■■□□□ 1.14
CCDC196A0A1B0GTZ2 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC22.19■■□□□ 1.14
CCDC196A0A1B0GTZ2 REXO1L10P-201ENST00000615707 1290 ntBASIC22.19■■□□□ 1.14
CCDC196A0A1B0GTZ2 REXO1L12P-201ENST00000622156 912 ntBASIC22.19■■□□□ 1.14
CCDC196A0A1B0GTZ2 KRT17P2-201ENST00000300992 1314 ntBASIC22.19■■□□□ 1.14
CCDC196A0A1B0GTZ2 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CCDC196A0A1B0GTZ2 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
CCDC196A0A1B0GTZ2 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
CCDC196A0A1B0GTZ2 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC22.19■■□□□ 1.14
CCDC196A0A1B0GTZ2 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
CCDC196A0A1B0GTZ2 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
CCDC196A0A1B0GTZ2 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
CCDC196A0A1B0GTZ2 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
CCDC196A0A1B0GTZ2 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CCDC196A0A1B0GTZ2 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CCDC196A0A1B0GTZ2 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CCDC196A0A1B0GTZ2 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CCDC196A0A1B0GTZ2 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CCDC196A0A1B0GTZ2 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CCDC196A0A1B0GTZ2 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
CCDC196A0A1B0GTZ2 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC22.18■■□□□ 1.14
CCDC196A0A1B0GTZ2 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CCDC196A0A1B0GTZ2 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
CCDC196A0A1B0GTZ2 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CCDC196A0A1B0GTZ2 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CCDC196A0A1B0GTZ2 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC22.18■■□□□ 1.14
CCDC196A0A1B0GTZ2 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CCDC196A0A1B0GTZ2 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC22.18■■□□□ 1.14
CCDC196A0A1B0GTZ2 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC22.18■■□□□ 1.14
CCDC196A0A1B0GTZ2 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC22.18■■□□□ 1.14
CCDC196A0A1B0GTZ2 CKBP1-201ENST00000565489 1086 ntBASIC22.18■■□□□ 1.14
CCDC196A0A1B0GTZ2 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC22.18■■□□□ 1.14
CCDC196A0A1B0GTZ2 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CCDC196A0A1B0GTZ2 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CCDC196A0A1B0GTZ2 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC22.18■■□□□ 1.14
CCDC196A0A1B0GTZ2 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CCDC196A0A1B0GTZ2 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CCDC196A0A1B0GTZ2 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CCDC196A0A1B0GTZ2 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
CCDC196A0A1B0GTZ2 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CCDC196A0A1B0GTZ2 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CCDC196A0A1B0GTZ2 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CCDC196A0A1B0GTZ2 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC22.17■■□□□ 1.14
CCDC196A0A1B0GTZ2 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC22.17■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms