Protein–RNA interactions for Protein: A0A0B4J273

TRAV34, T-cell receptor alpha variable 34 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV34A0A0B4J273 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC14.76□□□□□ -0.05
TRAV34A0A0B4J273 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV34A0A0B4J273 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV34A0A0B4J273 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC14.76□□□□□ -0.05
TRAV34A0A0B4J273 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
TRAV34A0A0B4J273 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV34A0A0B4J273 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV34A0A0B4J273 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
TRAV34A0A0B4J273 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
TRAV34A0A0B4J273 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
TRAV34A0A0B4J273 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC14.76□□□□□ -0.05
TRAV34A0A0B4J273 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC14.76□□□□□ -0.05
TRAV34A0A0B4J273 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC14.76□□□□□ -0.05
TRAV34A0A0B4J273 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC14.76□□□□□ -0.05
TRAV34A0A0B4J273 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC14.76□□□□□ -0.05
TRAV34A0A0B4J273 AC016405.3-201ENST00000607710 860 ntBASIC14.76□□□□□ -0.05
TRAV34A0A0B4J273 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV34A0A0B4J273 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV34A0A0B4J273 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV34A0A0B4J273 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC14.76□□□□□ -0.05
TRAV34A0A0B4J273 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC14.76□□□□□ -0.05
TRAV34A0A0B4J273 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
TRAV34A0A0B4J273 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV34A0A0B4J273 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV34A0A0B4J273 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
TRAV34A0A0B4J273 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC14.76□□□□□ -0.05
TRAV34A0A0B4J273 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV34A0A0B4J273 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV34A0A0B4J273 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV34A0A0B4J273 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV34A0A0B4J273 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
TRAV34A0A0B4J273 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV34A0A0B4J273 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV34A0A0B4J273 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV34A0A0B4J273 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
TRAV34A0A0B4J273 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV34A0A0B4J273 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC14.75□□□□□ -0.05
TRAV34A0A0B4J273 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV34A0A0B4J273 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV34A0A0B4J273 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV34A0A0B4J273 GAS2L1P2-201ENST00000436355 1356 ntBASIC14.75□□□□□ -0.05
TRAV34A0A0B4J273 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
TRAV34A0A0B4J273 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV34A0A0B4J273 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV34A0A0B4J273 AL139384.1-201ENST00000612143 3047 ntBASIC14.75□□□□□ -0.05
TRAV34A0A0B4J273 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC14.75□□□□□ -0.05
TRAV34A0A0B4J273 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
TRAV34A0A0B4J273 FP475955.4-201ENST00000623131 1990 ntBASIC14.75□□□□□ -0.05
TRAV34A0A0B4J273 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV34A0A0B4J273 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC14.75□□□□□ -0.05
TRAV34A0A0B4J273 NFIC-211ENST00000641145 8399 ntBASIC14.75□□□□□ -0.05
TRAV34A0A0B4J273 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
TRAV34A0A0B4J273 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC14.75□□□□□ -0.05
TRAV34A0A0B4J273 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV34A0A0B4J273 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
TRAV34A0A0B4J273 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV34A0A0B4J273 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC14.75□□□□□ -0.05
TRAV34A0A0B4J273 BMP1-204ENST00000397814 836 ntTSL 4 BASIC14.75□□□□□ -0.05
TRAV34A0A0B4J273 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV34A0A0B4J273 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC14.75□□□□□ -0.05
TRAV34A0A0B4J273 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC14.75□□□□□ -0.05
TRAV34A0A0B4J273 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC14.75□□□□□ -0.05
TRAV34A0A0B4J273 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
TRAV34A0A0B4J273 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC14.75□□□□□ -0.05
TRAV34A0A0B4J273 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV34A0A0B4J273 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV34A0A0B4J273 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC14.75□□□□□ -0.05
TRAV34A0A0B4J273 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV34A0A0B4J273 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV34A0A0B4J273 AC139713.2-201ENST00000641328 2723 ntBASIC14.75□□□□□ -0.05
TRAV34A0A0B4J273 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV34A0A0B4J273 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC14.75□□□□□ -0.05
TRAV34A0A0B4J273 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV34A0A0B4J273 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV34A0A0B4J273 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
TRAV34A0A0B4J273 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV34A0A0B4J273 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV34A0A0B4J273 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
TRAV34A0A0B4J273 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC14.74□□□□□ -0.05
TRAV34A0A0B4J273 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC14.74□□□□□ -0.05
TRAV34A0A0B4J273 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV34A0A0B4J273 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC14.74□□□□□ -0.05
TRAV34A0A0B4J273 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV34A0A0B4J273 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC14.74□□□□□ -0.05
TRAV34A0A0B4J273 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV34A0A0B4J273 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC14.74□□□□□ -0.05
TRAV34A0A0B4J273 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC14.74□□□□□ -0.05
TRAV34A0A0B4J273 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV34A0A0B4J273 PARP1-202ENST00000366792 553 ntTSL 3 BASIC14.74□□□□□ -0.05
TRAV34A0A0B4J273 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV34A0A0B4J273 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV34A0A0B4J273 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV34A0A0B4J273 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC14.74□□□□□ -0.05
TRAV34A0A0B4J273 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV34A0A0B4J273 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV34A0A0B4J273 MYCNOS-205ENST00000641950 531 ntBASIC14.74□□□□□ -0.05
TRAV34A0A0B4J273 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC14.74□□□□□ -0.05
TRAV34A0A0B4J273 AL031598.1-201ENST00000561511 1773 ntBASIC14.74□□□□□ -0.05
TRAV34A0A0B4J273 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
TRAV34A0A0B4J273 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms