Protein–RNA interactions for Protein: A0A0B4J271

TRAV12-3, T-cell receptor alpha variable 12-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3A0A0B4J271 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV12-3A0A0B4J271 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
TRAV12-3A0A0B4J271 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV12-3A0A0B4J271 HLA-L-209ENST00000420110 1011 ntBASIC14.21□□□□□ -0.13
TRAV12-3A0A0B4J271 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC14.21□□□□□ -0.13
TRAV12-3A0A0B4J271 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC14.21□□□□□ -0.13
TRAV12-3A0A0B4J271 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC14.21□□□□□ -0.13
TRAV12-3A0A0B4J271 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC14.21□□□□□ -0.13
TRAV12-3A0A0B4J271 NME1-207ENST00000480143 964 ntTSL 2 BASIC14.21□□□□□ -0.13
TRAV12-3A0A0B4J271 UNC93B4-201ENST00000505679 747 ntBASIC14.21□□□□□ -0.13
TRAV12-3A0A0B4J271 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC14.21□□□□□ -0.13
TRAV12-3A0A0B4J271 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC14.21□□□□□ -0.13
TRAV12-3A0A0B4J271 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV12-3A0A0B4J271 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
TRAV12-3A0A0B4J271 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC14.21□□□□□ -0.13
TRAV12-3A0A0B4J271 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV12-3A0A0B4J271 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV12-3A0A0B4J271 AC104417.2-201ENST00000562989 1793 ntBASIC14.21□□□□□ -0.13
TRAV12-3A0A0B4J271 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
TRAV12-3A0A0B4J271 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
TRAV12-3A0A0B4J271 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC14.21□□□□□ -0.14
TRAV12-3A0A0B4J271 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV12-3A0A0B4J271 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC14.2□□□□□ -0.14
TRAV12-3A0A0B4J271 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV12-3A0A0B4J271 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC14.2□□□□□ -0.14
TRAV12-3A0A0B4J271 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC14.2□□□□□ -0.14
TRAV12-3A0A0B4J271 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV12-3A0A0B4J271 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
TRAV12-3A0A0B4J271 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV12-3A0A0B4J271 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV12-3A0A0B4J271 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC14.2□□□□□ -0.14
TRAV12-3A0A0B4J271 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV12-3A0A0B4J271 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC14.2□□□□□ -0.14
TRAV12-3A0A0B4J271 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
TRAV12-3A0A0B4J271 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV12-3A0A0B4J271 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
TRAV12-3A0A0B4J271 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV12-3A0A0B4J271 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV12-3A0A0B4J271 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV12-3A0A0B4J271 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV12-3A0A0B4J271 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV12-3A0A0B4J271 TREX2-204ENST00000370212 861 ntTSL 5 BASIC14.2□□□□□ -0.14
TRAV12-3A0A0B4J271 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
TRAV12-3A0A0B4J271 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
TRAV12-3A0A0B4J271 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC14.2□□□□□ -0.14
TRAV12-3A0A0B4J271 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
TRAV12-3A0A0B4J271 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC14.2□□□□□ -0.14
TRAV12-3A0A0B4J271 THEM4-205ENST00000489410 643 ntTSL 2 BASIC14.2□□□□□ -0.14
TRAV12-3A0A0B4J271 KRT18P16-201ENST00000510337 1294 ntBASIC14.2□□□□□ -0.14
TRAV12-3A0A0B4J271 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV12-3A0A0B4J271 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC14.2□□□□□ -0.14
TRAV12-3A0A0B4J271 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC14.2□□□□□ -0.14
TRAV12-3A0A0B4J271 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV12-3A0A0B4J271 PRKY-204ENST00000533551 1019 ntBASIC14.2□□□□□ -0.14
TRAV12-3A0A0B4J271 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC14.2□□□□□ -0.14
TRAV12-3A0A0B4J271 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC14.2□□□□□ -0.14
TRAV12-3A0A0B4J271 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC14.2□□□□□ -0.14
TRAV12-3A0A0B4J271 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV12-3A0A0B4J271 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC14.2□□□□□ -0.14
TRAV12-3A0A0B4J271 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC14.2□□□□□ -0.14
TRAV12-3A0A0B4J271 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV12-3A0A0B4J271 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV12-3A0A0B4J271 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
TRAV12-3A0A0B4J271 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
TRAV12-3A0A0B4J271 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
TRAV12-3A0A0B4J271 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC14.2□□□□□ -0.14
TRAV12-3A0A0B4J271 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV12-3A0A0B4J271 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV12-3A0A0B4J271 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV12-3A0A0B4J271 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV12-3A0A0B4J271 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
TRAV12-3A0A0B4J271 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC14.19□□□□□ -0.14
TRAV12-3A0A0B4J271 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC14.19□□□□□ -0.14
TRAV12-3A0A0B4J271 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC14.19□□□□□ -0.14
TRAV12-3A0A0B4J271 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV12-3A0A0B4J271 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
TRAV12-3A0A0B4J271 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV12-3A0A0B4J271 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV12-3A0A0B4J271 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV12-3A0A0B4J271 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC14.19□□□□□ -0.14
TRAV12-3A0A0B4J271 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
TRAV12-3A0A0B4J271 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV12-3A0A0B4J271 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV12-3A0A0B4J271 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV12-3A0A0B4J271 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV12-3A0A0B4J271 NFIC-211ENST00000641145 8399 ntBASIC14.19□□□□□ -0.14
TRAV12-3A0A0B4J271 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV12-3A0A0B4J271 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV12-3A0A0B4J271 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV12-3A0A0B4J271 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV12-3A0A0B4J271 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV12-3A0A0B4J271 POM121L13P-201ENST00000422362 380 ntBASIC14.19□□□□□ -0.14
TRAV12-3A0A0B4J271 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
TRAV12-3A0A0B4J271 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
TRAV12-3A0A0B4J271 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV12-3A0A0B4J271 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC14.19□□□□□ -0.14
TRAV12-3A0A0B4J271 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV12-3A0A0B4J271 KLF2-202ENST00000592003 564 ntTSL 3 BASIC14.19□□□□□ -0.14
TRAV12-3A0A0B4J271 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV12-3A0A0B4J271 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms