Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC14.84□□□□□ -0.03
TRAV5A0A0B4J249 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC14.84□□□□□ -0.03
TRAV5A0A0B4J249 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV5A0A0B4J249 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
TRAV5A0A0B4J249 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
TRAV5A0A0B4J249 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV5A0A0B4J249 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV5A0A0B4J249 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV5A0A0B4J249 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV5A0A0B4J249 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TRAV5A0A0B4J249 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
TRAV5A0A0B4J249 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TRAV5A0A0B4J249 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
TRAV5A0A0B4J249 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC14.83□□□□□ -0.03
TRAV5A0A0B4J249 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
TRAV5A0A0B4J249 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
TRAV5A0A0B4J249 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
TRAV5A0A0B4J249 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV5A0A0B4J249 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC14.83□□□□□ -0.04
TRAV5A0A0B4J249 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV5A0A0B4J249 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC14.83□□□□□ -0.04
TRAV5A0A0B4J249 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV5A0A0B4J249 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC14.83□□□□□ -0.04
TRAV5A0A0B4J249 AL354751.1-201ENST00000412768 1863 ntBASIC14.83□□□□□ -0.04
TRAV5A0A0B4J249 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC14.83□□□□□ -0.04
TRAV5A0A0B4J249 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV5A0A0B4J249 MFF-205ENST00000354503 1085 ntTSL 2 BASIC14.83□□□□□ -0.04
TRAV5A0A0B4J249 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC14.83□□□□□ -0.04
TRAV5A0A0B4J249 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV5A0A0B4J249 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC14.83□□□□□ -0.04
TRAV5A0A0B4J249 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC14.83□□□□□ -0.04
TRAV5A0A0B4J249 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC14.83□□□□□ -0.04
TRAV5A0A0B4J249 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV5A0A0B4J249 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV5A0A0B4J249 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV5A0A0B4J249 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV5A0A0B4J249 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV5A0A0B4J249 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC14.83□□□□□ -0.04
TRAV5A0A0B4J249 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV5A0A0B4J249 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC14.83□□□□□ -0.04
TRAV5A0A0B4J249 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC14.83□□□□□ -0.04
TRAV5A0A0B4J249 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
TRAV5A0A0B4J249 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV5A0A0B4J249 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC14.83□□□□□ -0.04
TRAV5A0A0B4J249 EFTUD1P1-204ENST00000560401 1798 ntBASIC14.83□□□□□ -0.04
TRAV5A0A0B4J249 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV5A0A0B4J249 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV5A0A0B4J249 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC14.83□□□□□ -0.04
TRAV5A0A0B4J249 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV5A0A0B4J249 UBQLN4P1-201ENST00000461599 1801 ntBASIC14.82□□□□□ -0.04
TRAV5A0A0B4J249 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV5A0A0B4J249 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV5A0A0B4J249 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
TRAV5A0A0B4J249 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC14.82□□□□□ -0.04
TRAV5A0A0B4J249 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV5A0A0B4J249 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV5A0A0B4J249 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC14.82□□□□□ -0.04
TRAV5A0A0B4J249 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV5A0A0B4J249 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC14.82□□□□□ -0.04
TRAV5A0A0B4J249 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV5A0A0B4J249 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
TRAV5A0A0B4J249 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV5A0A0B4J249 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC14.82□□□□□ -0.04
TRAV5A0A0B4J249 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
TRAV5A0A0B4J249 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV5A0A0B4J249 GOLGA6L3-201ENST00000507199 1679 ntBASIC14.82□□□□□ -0.04
TRAV5A0A0B4J249 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
TRAV5A0A0B4J249 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC14.82□□□□□ -0.04
TRAV5A0A0B4J249 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC14.82□□□□□ -0.04
TRAV5A0A0B4J249 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
TRAV5A0A0B4J249 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
TRAV5A0A0B4J249 AC006557.6-201ENST00000623071 864 ntBASIC14.82□□□□□ -0.04
TRAV5A0A0B4J249 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
TRAV5A0A0B4J249 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV5A0A0B4J249 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
TRAV5A0A0B4J249 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC14.82□□□□□ -0.04
TRAV5A0A0B4J249 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC14.82□□□□□ -0.04
TRAV5A0A0B4J249 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
TRAV5A0A0B4J249 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
TRAV5A0A0B4J249 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
TRAV5A0A0B4J249 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV5A0A0B4J249 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV5A0A0B4J249 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV5A0A0B4J249 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV5A0A0B4J249 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV5A0A0B4J249 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
TRAV5A0A0B4J249 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC14.82□□□□□ -0.04
TRAV5A0A0B4J249 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV5A0A0B4J249 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV5A0A0B4J249 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV5A0A0B4J249 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV5A0A0B4J249 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
TRAV5A0A0B4J249 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV5A0A0B4J249 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV5A0A0B4J249 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC14.81□□□□□ -0.04
TRAV5A0A0B4J249 LTB4R2-202ENST00000528054 3092 ntBASIC14.81□□□□□ -0.04
TRAV5A0A0B4J249 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV5A0A0B4J249 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV5A0A0B4J249 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV5A0A0B4J249 AC004911.1-201ENST00000416316 871 ntBASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms