Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TRAV13-2A0A0B4J235 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TRAV13-2A0A0B4J235 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRAV13-2A0A0B4J235 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRAV13-2A0A0B4J235 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRAV13-2A0A0B4J235 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC12.61□□□□□ -0.39
TRAV13-2A0A0B4J235 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRAV13-2A0A0B4J235 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRAV13-2A0A0B4J235 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
TRAV13-2A0A0B4J235 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRAV13-2A0A0B4J235 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TRAV13-2A0A0B4J235 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
TRAV13-2A0A0B4J235 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
TRAV13-2A0A0B4J235 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC12.6□□□□□ -0.39
TRAV13-2A0A0B4J235 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRAV13-2A0A0B4J235 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TRAV13-2A0A0B4J235 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC12.6□□□□□ -0.39
TRAV13-2A0A0B4J235 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC12.6□□□□□ -0.39
TRAV13-2A0A0B4J235 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC12.6□□□□□ -0.39
TRAV13-2A0A0B4J235 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRAV13-2A0A0B4J235 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TRAV13-2A0A0B4J235 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRAV13-2A0A0B4J235 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRAV13-2A0A0B4J235 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TRAV13-2A0A0B4J235 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRAV13-2A0A0B4J235 HLA-G-202ENST00000376815 851 ntBASIC12.6□□□□□ -0.39
TRAV13-2A0A0B4J235 HLA-G-203ENST00000376818 1127 ntBASIC12.6□□□□□ -0.39
TRAV13-2A0A0B4J235 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
TRAV13-2A0A0B4J235 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRAV13-2A0A0B4J235 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC12.6□□□□□ -0.39
TRAV13-2A0A0B4J235 SERP1-208ENST00000491660 830 ntTSL 2 BASIC12.6□□□□□ -0.39
TRAV13-2A0A0B4J235 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC12.6□□□□□ -0.39
TRAV13-2A0A0B4J235 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC12.6□□□□□ -0.39
TRAV13-2A0A0B4J235 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRAV13-2A0A0B4J235 AC243732.1-201ENST00000612648 864 ntBASIC12.6□□□□□ -0.39
TRAV13-2A0A0B4J235 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC12.6□□□□□ -0.39
TRAV13-2A0A0B4J235 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRAV13-2A0A0B4J235 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC12.6□□□□□ -0.39
TRAV13-2A0A0B4J235 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRAV13-2A0A0B4J235 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC12.6□□□□□ -0.39
TRAV13-2A0A0B4J235 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRAV13-2A0A0B4J235 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC12.6□□□□□ -0.39
TRAV13-2A0A0B4J235 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRAV13-2A0A0B4J235 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC12.6□□□□□ -0.39
TRAV13-2A0A0B4J235 AC087633.2-202ENST00000565166 1439 ntBASIC12.6□□□□□ -0.39
TRAV13-2A0A0B4J235 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRAV13-2A0A0B4J235 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC12.6□□□□□ -0.39
TRAV13-2A0A0B4J235 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRAV13-2A0A0B4J235 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC12.6□□□□□ -0.39
TRAV13-2A0A0B4J235 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRAV13-2A0A0B4J235 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC12.59□□□□□ -0.39
TRAV13-2A0A0B4J235 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC12.59□□□□□ -0.39
TRAV13-2A0A0B4J235 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRAV13-2A0A0B4J235 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRAV13-2A0A0B4J235 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC12.59□□□□□ -0.39
TRAV13-2A0A0B4J235 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC12.59□□□□□ -0.39
TRAV13-2A0A0B4J235 PTBP1P-201ENST00000554374 1601 ntBASIC12.59□□□□□ -0.39
TRAV13-2A0A0B4J235 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRAV13-2A0A0B4J235 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TRAV13-2A0A0B4J235 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRAV13-2A0A0B4J235 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC12.59□□□□□ -0.39
TRAV13-2A0A0B4J235 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
TRAV13-2A0A0B4J235 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRAV13-2A0A0B4J235 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
TRAV13-2A0A0B4J235 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRAV13-2A0A0B4J235 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRAV13-2A0A0B4J235 NAA20-201ENST00000310450 920 ntTSL 2 BASIC12.59□□□□□ -0.39
TRAV13-2A0A0B4J235 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRAV13-2A0A0B4J235 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRAV13-2A0A0B4J235 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRAV13-2A0A0B4J235 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRAV13-2A0A0B4J235 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
TRAV13-2A0A0B4J235 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC12.59□□□□□ -0.39
TRAV13-2A0A0B4J235 QDPR-206ENST00000508623 601 ntTSL 3 BASIC12.59□□□□□ -0.39
TRAV13-2A0A0B4J235 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC12.59□□□□□ -0.39
TRAV13-2A0A0B4J235 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC12.59□□□□□ -0.39
TRAV13-2A0A0B4J235 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
TRAV13-2A0A0B4J235 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRAV13-2A0A0B4J235 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
TRAV13-2A0A0B4J235 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TRAV13-2A0A0B4J235 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC12.59□□□□□ -0.39
TRAV13-2A0A0B4J235 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
TRAV13-2A0A0B4J235 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC12.59□□□□□ -0.39
TRAV13-2A0A0B4J235 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRAV13-2A0A0B4J235 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRAV13-2A0A0B4J235 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
TRAV13-2A0A0B4J235 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TRAV13-2A0A0B4J235 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRAV13-2A0A0B4J235 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC12.59□□□□□ -0.39
TRAV13-2A0A0B4J235 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC12.59□□□□□ -0.39
TRAV13-2A0A0B4J235 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRAV13-2A0A0B4J235 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC12.59□□□□□ -0.39
TRAV13-2A0A0B4J235 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRAV13-2A0A0B4J235 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRAV13-2A0A0B4J235 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TRAV13-2A0A0B4J235 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC12.58□□□□□ -0.39
TRAV13-2A0A0B4J235 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
TRAV13-2A0A0B4J235 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
TRAV13-2A0A0B4J235 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC12.58□□□□□ -0.4
TRAV13-2A0A0B4J235 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC12.58□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms