Protein–RNA interactions for Protein: A0A075B6P5

IGKV2-28, Immunoglobulin kappa variable 2-28, humanhuman

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV2-28A0A075B6P5 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
IGKV2-28A0A075B6P5 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC12.62□□□□□ -0.39
IGKV2-28A0A075B6P5 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
IGKV2-28A0A075B6P5 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC12.62□□□□□ -0.39
IGKV2-28A0A075B6P5 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
IGKV2-28A0A075B6P5 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
IGKV2-28A0A075B6P5 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC12.62□□□□□ -0.39
IGKV2-28A0A075B6P5 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
IGKV2-28A0A075B6P5 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
IGKV2-28A0A075B6P5 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
IGKV2-28A0A075B6P5 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
IGKV2-28A0A075B6P5 AC034268.1-201ENST00000441047 882 ntBASIC12.62□□□□□ -0.39
IGKV2-28A0A075B6P5 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC12.62□□□□□ -0.39
IGKV2-28A0A075B6P5 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC12.62□□□□□ -0.39
IGKV2-28A0A075B6P5 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC12.62□□□□□ -0.39
IGKV2-28A0A075B6P5 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC12.62□□□□□ -0.39
IGKV2-28A0A075B6P5 AC016405.3-201ENST00000607710 860 ntBASIC12.62□□□□□ -0.39
IGKV2-28A0A075B6P5 AC013268.1-206ENST00000638368 961 ntBASIC12.62□□□□□ -0.39
IGKV2-28A0A075B6P5 AC112229.1-201ENST00000639295 961 ntBASIC12.62□□□□□ -0.39
IGKV2-28A0A075B6P5 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
IGKV2-28A0A075B6P5 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC12.62□□□□□ -0.39
IGKV2-28A0A075B6P5 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC12.62□□□□□ -0.39
IGKV2-28A0A075B6P5 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
IGKV2-28A0A075B6P5 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
IGKV2-28A0A075B6P5 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC12.62□□□□□ -0.39
IGKV2-28A0A075B6P5 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC12.62□□□□□ -0.39
IGKV2-28A0A075B6P5 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
IGKV2-28A0A075B6P5 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC12.62□□□□□ -0.39
IGKV2-28A0A075B6P5 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
IGKV2-28A0A075B6P5 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC12.62□□□□□ -0.39
IGKV2-28A0A075B6P5 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
IGKV2-28A0A075B6P5 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
IGKV2-28A0A075B6P5 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
IGKV2-28A0A075B6P5 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
IGKV2-28A0A075B6P5 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
IGKV2-28A0A075B6P5 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
IGKV2-28A0A075B6P5 CD276-203ENST00000537340 2439 ntTSL 2 BASIC12.61□□□□□ -0.39
IGKV2-28A0A075B6P5 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
IGKV2-28A0A075B6P5 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
IGKV2-28A0A075B6P5 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC12.61□□□□□ -0.39
IGKV2-28A0A075B6P5 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
IGKV2-28A0A075B6P5 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC12.61□□□□□ -0.39
IGKV2-28A0A075B6P5 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
IGKV2-28A0A075B6P5 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
IGKV2-28A0A075B6P5 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
IGKV2-28A0A075B6P5 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC12.61□□□□□ -0.39
IGKV2-28A0A075B6P5 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
IGKV2-28A0A075B6P5 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
IGKV2-28A0A075B6P5 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
IGKV2-28A0A075B6P5 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
IGKV2-28A0A075B6P5 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
IGKV2-28A0A075B6P5 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
IGKV2-28A0A075B6P5 AC016769.1-201ENST00000409132 1010 ntBASIC12.61□□□□□ -0.39
IGKV2-28A0A075B6P5 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
IGKV2-28A0A075B6P5 GXYLT1P2-201ENST00000433312 1230 ntBASIC12.61□□□□□ -0.39
IGKV2-28A0A075B6P5 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC12.61□□□□□ -0.39
IGKV2-28A0A075B6P5 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC12.61□□□□□ -0.39
IGKV2-28A0A075B6P5 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC12.61□□□□□ -0.39
IGKV2-28A0A075B6P5 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
IGKV2-28A0A075B6P5 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
IGKV2-28A0A075B6P5 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
IGKV2-28A0A075B6P5 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
IGKV2-28A0A075B6P5 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC12.61□□□□□ -0.39
IGKV2-28A0A075B6P5 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC12.61□□□□□ -0.39
IGKV2-28A0A075B6P5 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
IGKV2-28A0A075B6P5 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
IGKV2-28A0A075B6P5 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
IGKV2-28A0A075B6P5 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC12.61□□□□□ -0.39
IGKV2-28A0A075B6P5 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
IGKV2-28A0A075B6P5 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC12.61□□□□□ -0.39
IGKV2-28A0A075B6P5 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
IGKV2-28A0A075B6P5 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC12.61□□□□□ -0.39
IGKV2-28A0A075B6P5 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
IGKV2-28A0A075B6P5 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
IGKV2-28A0A075B6P5 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC12.61□□□□□ -0.39
IGKV2-28A0A075B6P5 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC12.61□□□□□ -0.39
IGKV2-28A0A075B6P5 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC12.61□□□□□ -0.39
IGKV2-28A0A075B6P5 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
IGKV2-28A0A075B6P5 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
IGKV2-28A0A075B6P5 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC12.6□□□□□ -0.39
IGKV2-28A0A075B6P5 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
IGKV2-28A0A075B6P5 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC12.6□□□□□ -0.39
IGKV2-28A0A075B6P5 ABALON-201ENST00000629058 1903 ntBASIC12.6□□□□□ -0.39
IGKV2-28A0A075B6P5 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC12.6□□□□□ -0.39
IGKV2-28A0A075B6P5 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC12.6□□□□□ -0.39
IGKV2-28A0A075B6P5 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
IGKV2-28A0A075B6P5 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
IGKV2-28A0A075B6P5 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC12.6□□□□□ -0.39
IGKV2-28A0A075B6P5 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
IGKV2-28A0A075B6P5 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
IGKV2-28A0A075B6P5 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC12.6□□□□□ -0.39
IGKV2-28A0A075B6P5 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC12.6□□□□□ -0.39
IGKV2-28A0A075B6P5 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
IGKV2-28A0A075B6P5 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
IGKV2-28A0A075B6P5 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
IGKV2-28A0A075B6P5 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
IGKV2-28A0A075B6P5 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
IGKV2-28A0A075B6P5 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC12.6□□□□□ -0.39
IGKV2-28A0A075B6P5 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
IGKV2-28A0A075B6P5 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms