Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC5.24□□□□□ -1.57
LYSMD3Q7Z3D4 AL365222.1-201ENST00000614661 98 ntBASIC5.24□□□□□ -1.57
LYSMD3Q7Z3D4 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC5.24□□□□□ -1.57
LYSMD3Q7Z3D4 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
LYSMD3Q7Z3D4 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.24□□□□□ -1.57
LYSMD3Q7Z3D4 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC5.24□□□□□ -1.57
LYSMD3Q7Z3D4 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC5.24□□□□□ -1.57
LYSMD3Q7Z3D4 AL731532.2-201ENST00000623542 1953 ntBASIC5.24□□□□□ -1.57
LYSMD3Q7Z3D4 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
LYSMD3Q7Z3D4 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
LYSMD3Q7Z3D4 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
LYSMD3Q7Z3D4 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
LYSMD3Q7Z3D4 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
LYSMD3Q7Z3D4 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.23□□□□□ -1.57
LYSMD3Q7Z3D4 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
LYSMD3Q7Z3D4 AL022311.1-201ENST00000623726 19416 ntBASIC5.23□□□□□ -1.57
LYSMD3Q7Z3D4 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.23□□□□□ -1.57
LYSMD3Q7Z3D4 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC5.23□□□□□ -1.57
LYSMD3Q7Z3D4 AL606537.1-201ENST00000607258 2011 ntBASIC5.23□□□□□ -1.57
LYSMD3Q7Z3D4 AL034549.2-201ENST00000618285 3373 ntBASIC5.23□□□□□ -1.57
LYSMD3Q7Z3D4 RNU6-923P-201ENST00000364753 107 ntBASIC5.23□□□□□ -1.57
LYSMD3Q7Z3D4 RNA5SP90-201ENST00000364801 99 ntBASIC5.23□□□□□ -1.57
LYSMD3Q7Z3D4 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
LYSMD3Q7Z3D4 Y_RNA.497-201ENST00000384447 98 ntBASIC5.23□□□□□ -1.57
LYSMD3Q7Z3D4 RN7SKP213-201ENST00000410746 298 ntBASIC5.23□□□□□ -1.57
LYSMD3Q7Z3D4 RNU2-61P-201ENST00000411069 191 ntBASIC5.23□□□□□ -1.57
LYSMD3Q7Z3D4 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC5.23□□□□□ -1.57
LYSMD3Q7Z3D4 SNORD56-201ENST00000413522 71 ntBASIC5.23□□□□□ -1.57
LYSMD3Q7Z3D4 SSXP9-201ENST00000417503 292 ntBASIC5.23□□□□□ -1.57
LYSMD3Q7Z3D4 AL451062.2-201ENST00000427515 271 ntBASIC5.23□□□□□ -1.57
LYSMD3Q7Z3D4 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC5.23□□□□□ -1.57
LYSMD3Q7Z3D4 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.23□□□□□ -1.57
LYSMD3Q7Z3D4 Y_RNA.638-201ENST00000459374 113 ntBASIC5.23□□□□□ -1.57
LYSMD3Q7Z3D4 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.23□□□□□ -1.57
LYSMD3Q7Z3D4 RN7SL222P-201ENST00000476452 299 ntBASIC5.23□□□□□ -1.57
LYSMD3Q7Z3D4 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC5.23□□□□□ -1.57
LYSMD3Q7Z3D4 ANXA2P1-201ENST00000505539 926 ntBASIC5.23□□□□□ -1.57
LYSMD3Q7Z3D4 RNU6-1219P-201ENST00000516143 112 ntBASIC5.23□□□□□ -1.57
LYSMD3Q7Z3D4 Y_RNA.706-201ENST00000516933 99 ntBASIC5.23□□□□□ -1.57
LYSMD3Q7Z3D4 RNU6-840P-201ENST00000517275 65 ntBASIC5.23□□□□□ -1.57
LYSMD3Q7Z3D4 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
LYSMD3Q7Z3D4 AC024940.3-201ENST00000538551 316 ntBASIC5.23□□□□□ -1.57
LYSMD3Q7Z3D4 TRAV37-201ENST00000553906 342 ntBASIC5.23□□□□□ -1.57
LYSMD3Q7Z3D4 AL358913.1-201ENST00000554342 121 ntBASIC5.23□□□□□ -1.57
LYSMD3Q7Z3D4 MIR4472-2-201ENST00000582069 67 ntBASIC5.23□□□□□ -1.57
LYSMD3Q7Z3D4 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC5.23□□□□□ -1.57
LYSMD3Q7Z3D4 AP000787.2-201ENST00000604432 568 ntBASIC5.23□□□□□ -1.57
LYSMD3Q7Z3D4 Z99571.1-201ENST00000636677 394 ntBASIC5.23□□□□□ -1.57
LYSMD3Q7Z3D4 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC5.23□□□□□ -1.57
LYSMD3Q7Z3D4 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
LYSMD3Q7Z3D4 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
LYSMD3Q7Z3D4 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
LYSMD3Q7Z3D4 RBBP8P1-201ENST00000449447 1844 ntBASIC5.23□□□□□ -1.57
LYSMD3Q7Z3D4 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
LYSMD3Q7Z3D4 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.22□□□□□ -1.57
LYSMD3Q7Z3D4 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
LYSMD3Q7Z3D4 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC5.22□□□□□ -1.57
LYSMD3Q7Z3D4 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.22□□□□□ -1.57
LYSMD3Q7Z3D4 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
LYSMD3Q7Z3D4 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
LYSMD3Q7Z3D4 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
LYSMD3Q7Z3D4 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
LYSMD3Q7Z3D4 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
LYSMD3Q7Z3D4 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
LYSMD3Q7Z3D4 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
LYSMD3Q7Z3D4 SNORD20-201ENST00000384550 80 ntBASIC5.22□□□□□ -1.57
LYSMD3Q7Z3D4 MIR600-201ENST00000385007 98 ntBASIC5.22□□□□□ -1.57
LYSMD3Q7Z3D4 SNORA48.4-201ENST00000391089 134 ntBASIC5.22□□□□□ -1.57
LYSMD3Q7Z3D4 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC5.22□□□□□ -1.57
LYSMD3Q7Z3D4 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.22□□□□□ -1.57
LYSMD3Q7Z3D4 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC5.22□□□□□ -1.57
LYSMD3Q7Z3D4 RPS29P10-201ENST00000439197 166 ntBASIC5.22□□□□□ -1.57
LYSMD3Q7Z3D4 CEACAMP7-201ENST00000444105 496 ntBASIC5.22□□□□□ -1.57
LYSMD3Q7Z3D4 AC009127.1-201ENST00000467090 155 ntBASIC5.22□□□□□ -1.57
LYSMD3Q7Z3D4 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC5.22□□□□□ -1.57
LYSMD3Q7Z3D4 AC098976.1-201ENST00000513014 541 ntBASIC5.22□□□□□ -1.57
LYSMD3Q7Z3D4 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC5.22□□□□□ -1.57
LYSMD3Q7Z3D4 H3F3AP1-201ENST00000559984 334 ntBASIC5.22□□□□□ -1.57
LYSMD3Q7Z3D4 AC040958.1-201ENST00000561102 201 ntBASIC5.22□□□□□ -1.57
LYSMD3Q7Z3D4 RPL23AP78-201ENST00000599928 470 ntBASIC5.22□□□□□ -1.57
LYSMD3Q7Z3D4 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.22□□□□□ -1.57
LYSMD3Q7Z3D4 AC068870.2-201ENST00000620635 389 ntBASIC5.22□□□□□ -1.57
LYSMD3Q7Z3D4 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
LYSMD3Q7Z3D4 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
LYSMD3Q7Z3D4 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
LYSMD3Q7Z3D4 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
LYSMD3Q7Z3D4 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
LYSMD3Q7Z3D4 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
LYSMD3Q7Z3D4 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
LYSMD3Q7Z3D4 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
LYSMD3Q7Z3D4 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
LYSMD3Q7Z3D4 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
LYSMD3Q7Z3D4 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
LYSMD3Q7Z3D4 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.21□□□□□ -1.58
LYSMD3Q7Z3D4 SNORA17.1-201ENST00000362945 126 ntBASIC5.21□□□□□ -1.58
LYSMD3Q7Z3D4 Y_RNA.275-201ENST00000364726 110 ntBASIC5.21□□□□□ -1.58
LYSMD3Q7Z3D4 Y_RNA.286-201ENST00000364813 102 ntBASIC5.21□□□□□ -1.58
LYSMD3Q7Z3D4 RNA5SP223-201ENST00000365174 120 ntBASIC5.21□□□□□ -1.58
LYSMD3Q7Z3D4 AL133270.1-201ENST00000402635 279 ntBASIC5.21□□□□□ -1.58
LYSMD3Q7Z3D4 COX5BP7-201ENST00000414780 274 ntBASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms