RNA–Protein interactions for RNA: ENST00000560158.6

LRRC49-222, Transcript of leucine rich repeat containing 49, humanhuman

TSL 5 BASIC

Gene LRRC49, Length 1,898 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC49-222ENST00000560158 AEBP2Q6ZN18 517 aaPredicted RBP15.57■□□□□ 0.08
LRRC49-222ENST00000560158 POTEDQ86YR6 584 aa14.65□□□□□ -0.06
LRRC49-222ENST00000560158 CHIC1Q5VXU3 224 aa14.53□□□□□ -0.08
LRRC49-222ENST00000560158 SENP3Q9H4L4 574 aaPredicted RBP13.53□□□□□ -0.24
LRRC49-222ENST00000560158 PHF23Q9BUL5 403 aaPredicted RBP13.12□□□□□ -0.31
LRRC49-222ENST00000560158 FOXD1Q16676 465 aa12.76□□□□□ -0.37
LRRC49-222ENST00000560158 MSH5O43196 834 aa12.53□□□□□ -0.4
LRRC49-222ENST00000560158 CACNB1Q02641 598 aaPredicted RBP11.59□□□□□ -0.55
LRRC49-222ENST00000560158 PIAS4Q8N2W9 510 aaPredicted RBP11.55□□□□□ -0.56
LRRC49-222ENST00000560158 POTEHQ6S545 545 aa11.19□□□□□ -0.62
LRRC49-222ENST00000560158 PLPPR3Q6T4P5 718 aa10.81□□□□□ -0.68
LRRC49-222ENST00000560158 PPP6R1Q9UPN7 881 aa10.81□□□□□ -0.68
LRRC49-222ENST00000560158 ADRA2BP18089 450 aa10.67□□□□□ -0.7
LRRC49-222ENST00000560158 RNF39Q9H2S5 420 aa10.55□□□□□ -0.72
LRRC49-222ENST00000560158 DMRT2Q9Y5R5 561 aa10.51□□□□□ -0.73
LRRC49-222ENST00000560158 EHMT2Q96KQ7 1210 aa10.41□□□□□ -0.74
LRRC49-222ENST00000560158 KCNA4P22459 653 aa10.34□□□□□ -0.75
LRRC49-222ENST00000560158 C1QBPQ07021 282 aaKnown RBP10.32□□□□□ -0.76
LRRC49-222ENST00000560158 MAPK8IP2Q13387 824 aaPredicted RBP10.23□□□□□ -0.77
LRRC49-222ENST00000560158 DCAF8L1A6NGE4 600 aa10.05□□□□□ -0.8
LRRC49-222ENST00000560158 CSRNP3Q8WYN3 585 aa10.04□□□□□ -0.8
LRRC49-222ENST00000560158 SP7Q8TDD2 431 aaPredicted RBP9.83□□□□□ -0.84
LRRC49-222ENST00000560158 SLC4A1APQ9BWU0 796 aaKnown RBP9.83□□□□□ -0.84
LRRC49-222ENST00000560158 SCAF1Q9H7N4 1312 aaKnown RBP9.82□□□□□ -0.84
LRRC49-222ENST00000560158 PLSCR2Q9NRY7 297 aa9.77□□□□□ -0.85
LRRC49-222ENST00000560158 PPP4R3CPQ6ZMV5 832 aa9.68□□□□□ -0.86
LRRC49-222ENST00000560158 ZBTB22O15209 634 aa9.64□□□□□ -0.87
LRRC49-222ENST00000560158 DNAJC5BQ9UF47 199 aa9.59□□□□□ -0.87
LRRC49-222ENST00000560158 HOXD11P31277 338 aaPredicted RBP9.58□□□□□ -0.88
LRRC49-222ENST00000560158 NPM3O75607 178 aaKnown RBP9.55□□□□□ -0.88
LRRC49-222ENST00000560158 SLC24A1O60721 1099 aa9.49□□□□□ -0.89
LRRC49-222ENST00000560158 RTN4Q9NQC3 1192 aaKnown RBP9.44□□□□□ -0.9
LRRC49-222ENST00000560158 NCBP3Q53F19 620 aaKnown RBP9.43□□□□□ -0.9
LRRC49-222ENST00000560158 DSG3P32926 999 aa9.38□□□□□ -0.91
LRRC49-222ENST00000560158 CHRDL2Q6WN34 429 aa9.35□□□□□ -0.91
LRRC49-222ENST00000560158 AMER1Q5JTC6 1135 aaPredicted RBP9.21□□□□□ -0.94
LRRC49-222ENST00000560158 CNKSR2Q8WXI2 1034 aa9.19□□□□□ -0.94
LRRC49-222ENST00000560158 LHX8Q68G74 356 aa9.19□□□□□ -0.94
LRRC49-222ENST00000560158 FOXD4L1Q9NU39 408 aa9.18□□□□□ -0.94
LRRC49-222ENST00000560158 RNF216Q9NWF9 866 aaPredicted RBP9.1□□□□□ -0.95
LRRC49-222ENST00000560158 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.05□□□□□ -0.96
LRRC49-222ENST00000560158 CAPN15O75808 1086 aa9.04□□□□□ -0.96
LRRC49-222ENST00000560158 HAX1O00165 279 aa9.02□□□□□ -0.97
LRRC49-222ENST00000560158 RBM42Q9BTD8 480 aaKnown RBP9.01□□□□□ -0.97
LRRC49-222ENST00000560158 SPINK5Q9NQ38 1064 aaPredicted RBP9□□□□□ -0.97
LRRC49-222ENST00000560158 SLC4A2P04920 1241 aa8.93□□□□□ -0.98
LRRC49-222ENST00000560158 FKBP8Q14318 412 aa8.93□□□□□ -0.98
LRRC49-222ENST00000560158 PIP4P2Q8N4L2 257 aa8.83□□□□□ -1
LRRC49-222ENST00000560158 EVX2Q03828 476 aa8.81□□□□□ -1
LRRC49-222ENST00000560158 PCDH10Q9P2E7 1040 aa8.72□□□□□ -1.01
LRRC49-222ENST00000560158 U3KPZ7 1027 aaPredicted RBP8.72□□□□□ -1.01
LRRC49-222ENST00000560158 POTEMA6NI47 508 aa8.72□□□□□ -1.01
LRRC49-222ENST00000560158 ATXN8OSP0DMR3 200 aa8.72□□□□□ -1.01
LRRC49-222ENST00000560158 ABCB7O75027 752 aa8.7□□□□□ -1.02
LRRC49-222ENST00000560158 MYCNP04198 464 aaPredicted RBP8.68□□□□□ -1.02
LRRC49-222ENST00000560158 ATF5Q9Y2D1 282 aaPredicted RBP8.64□□□□□ -1.03
LRRC49-222ENST00000560158 POTEGQ6S5H5 508 aa8.64□□□□□ -1.03
LRRC49-222ENST00000560158 FXR2P51116 673 aaKnown RBP eCLIP8.57□□□□□ -1.04
LRRC49-222ENST00000560158 PLCB2Q00722 1185 aa8.56□□□□□ -1.04
LRRC49-222ENST00000560158 GABBR2O75899 941 aa8.55□□□□□ -1.04
LRRC49-222ENST00000560158 PRKCSHP14314 528 aaPredicted RBP8.55□□□□□ -1.04
LRRC49-222ENST00000560158 TRHP20396 242 aaPredicted RBP8.55□□□□□ -1.04
LRRC49-222ENST00000560158 ZNF219Q9P2Y4 722 aaPredicted RBP8.53□□□□□ -1.04
LRRC49-222ENST00000560158 AKT1S1Q96B36 256 aa8.5□□□□□ -1.05
LRRC49-222ENST00000560158 REM2Q8IYK8 340 aaPredicted RBP8.39□□□□□ -1.07
LRRC49-222ENST00000560158 HAP1P54257 671 aaPredicted RBP8.38□□□□□ -1.07
LRRC49-222ENST00000560158 TAOK2Q9UL54 1235 aa8.38□□□□□ -1.07
LRRC49-222ENST00000560158 POTEIP0CG38 1075 aa8.37□□□□□ -1.07
LRRC49-222ENST00000560158 APLP2Q06481 763 aa8.37□□□□□ -1.07
LRRC49-222ENST00000560158 C19orf67A6NJJ6 358 aa8.35□□□□□ -1.07
LRRC49-222ENST00000560158 OTUD5Q96G74 571 aa8.32□□□□□ -1.08
LRRC49-222ENST00000560158 BCANQ96GW7 911 aa8.32□□□□□ -1.08
LRRC49-222ENST00000560158 PITPNM1O00562 1244 aa8.32□□□□□ -1.08
LRRC49-222ENST00000560158 PKD2Q13563 968 aa8.31□□□□□ -1.08
LRRC49-222ENST00000560158 PROM2Q8N271 834 aa8.31□□□□□ -1.08
LRRC49-222ENST00000560158 IFNLR1Q8IU57 520 aaPredicted RBP8.3□□□□□ -1.08
LRRC49-222ENST00000560158 KDM2AQ9Y2K7 1162 aa8.3□□□□□ -1.08
LRRC49-222ENST00000560158 VASPP50552 380 aaPredicted RBP8.28□□□□□ -1.08
LRRC49-222ENST00000560158 MKRN4PQ13434 485 aaPredicted RBP8.28□□□□□ -1.08
LRRC49-222ENST00000560158 FBLN2P98095 1184 aa8.26□□□□□ -1.09
LRRC49-222ENST00000560158 SPDYE4A6NLX3 237 aa8.23□□□□□ -1.09
LRRC49-222ENST00000560158 TPRNQ4KMQ1 711 aa8.23□□□□□ -1.09
LRRC49-222ENST00000560158 VSIG10Q8N0Z9 540 aa8.23□□□□□ -1.09
LRRC49-222ENST00000560158 FBXO3Q9UK99 471 aa8.23□□□□□ -1.09
LRRC49-222ENST00000560158 DCAF8L2P0C7V8 631 aa8.21□□□□□ -1.1
LRRC49-222ENST00000560158 SAMD1Q6SPF0 538 aaPredicted RBP8.21□□□□□ -1.1
LRRC49-222ENST00000560158 NPM1P06748 294 aaKnown RBP eCLIP8.19□□□□□ -1.1
LRRC49-222ENST00000560158 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.13□□□□□ -1.11
LRRC49-222ENST00000560158 HNRNPUL2Q1KMD3 747 aaKnown RBP8.13□□□□□ -1.11
LRRC49-222ENST00000560158 NISCHQ9Y2I1 1504 aa8.11□□□□□ -1.11
LRRC49-222ENST00000560158 LCE2DQ5TA82 110 aaPredicted RBP8.09□□□□□ -1.11
LRRC49-222ENST00000560158 PRKAR2AP13861 404 aaKnown RBP8.07□□□□□ -1.12
LRRC49-222ENST00000560158 PAXIP1Q6ZW49 1069 aaPredicted RBP8.06□□□□□ -1.12
LRRC49-222ENST00000560158 TIMELESSQ9UNS1 1208 aa8.06□□□□□ -1.12
LRRC49-222ENST00000560158 BBXQ8WY36 941 aaPredicted RBP8.06□□□□□ -1.12
LRRC49-222ENST00000560158 TSHZ2Q9NRE2 1034 aa8.05□□□□□ -1.12
LRRC49-222ENST00000560158 POTEB2H3BUK9 544 aa8.04□□□□□ -1.12
LRRC49-222ENST00000560158 CFAP44Q96MT7 982 aa8.03□□□□□ -1.12
LRRC49-222ENST00000560158 RGL2O15211 777 aa8.02□□□□□ -1.13
LRRC49-222ENST00000560158 POLA2Q14181 598 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 265.8 ms