Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC5.2□□□□□ -1.58
CNTN3Q9P232 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CNTN3Q9P232 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CNTN3Q9P232 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
CNTN3Q9P232 MTND5P7-201ENST00000413558 1798 ntBASIC5.19□□□□□ -1.58
CNTN3Q9P232 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CNTN3Q9P232 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
CNTN3Q9P232 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
CNTN3Q9P232 EOGT-210ENST00000615922 1931 ntBASIC5.19□□□□□ -1.58
CNTN3Q9P232 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
CNTN3Q9P232 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
CNTN3Q9P232 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
CNTN3Q9P232 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
CNTN3Q9P232 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.19□□□□□ -1.58
CNTN3Q9P232 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
CNTN3Q9P232 LINC01109-201ENST00000603837 3081 ntBASIC5.19□□□□□ -1.58
CNTN3Q9P232 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.19□□□□□ -1.58
CNTN3Q9P232 RN7SKP115-201ENST00000363177 317 ntBASIC5.19□□□□□ -1.58
CNTN3Q9P232 RNU6-1059P-201ENST00000363752 98 ntBASIC5.19□□□□□ -1.58
CNTN3Q9P232 SNORD14.1-201ENST00000365609 90 ntBASIC5.19□□□□□ -1.58
CNTN3Q9P232 Y_RNA.485-201ENST00000384395 102 ntBASIC5.19□□□□□ -1.58
CNTN3Q9P232 Y_RNA.552-201ENST00000384665 112 ntBASIC5.19□□□□□ -1.58
CNTN3Q9P232 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC5.19□□□□□ -1.58
CNTN3Q9P232 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.19□□□□□ -1.58
CNTN3Q9P232 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC5.19□□□□□ -1.58
CNTN3Q9P232 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC5.19□□□□□ -1.58
CNTN3Q9P232 AC011753.3-201ENST00000443436 406 ntBASIC5.19□□□□□ -1.58
CNTN3Q9P232 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC5.19□□□□□ -1.58
CNTN3Q9P232 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.19□□□□□ -1.58
CNTN3Q9P232 RPS29P33-201ENST00000456717 146 ntBASIC5.19□□□□□ -1.58
CNTN3Q9P232 RPL9P32-201ENST00000464118 620 ntBASIC5.19□□□□□ -1.58
CNTN3Q9P232 AC008571.1-201ENST00000467232 300 ntBASIC5.19□□□□□ -1.58
CNTN3Q9P232 SLC25A15P5-201ENST00000508033 253 ntBASIC5.19□□□□□ -1.58
CNTN3Q9P232 AC107222.1-201ENST00000510899 637 ntBASIC5.19□□□□□ -1.58
CNTN3Q9P232 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC5.19□□□□□ -1.58
CNTN3Q9P232 AC131281.1-201ENST00000522984 164 ntBASIC5.19□□□□□ -1.58
CNTN3Q9P232 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC5.19□□□□□ -1.58
CNTN3Q9P232 AP006289.1-201ENST00000538089 277 ntBASIC5.19□□□□□ -1.58
CNTN3Q9P232 MIR4330-201ENST00000579077 105 ntBASIC5.19□□□□□ -1.58
CNTN3Q9P232 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC5.19□□□□□ -1.58
CNTN3Q9P232 uc_338.18-201ENST00000615451 175 ntBASIC5.19□□□□□ -1.58
CNTN3Q9P232 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CNTN3Q9P232 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CNTN3Q9P232 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CNTN3Q9P232 PCAT14-202ENST00000627127 3935 ntBASIC5.19□□□□□ -1.58
CNTN3Q9P232 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.19□□□□□ -1.58
CNTN3Q9P232 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.19□□□□□ -1.58
CNTN3Q9P232 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CNTN3Q9P232 AC139769.1-204ENST00000472297 1931 ntBASIC5.19□□□□□ -1.58
CNTN3Q9P232 AL731566.1-201ENST00000620490 1937 ntBASIC5.19□□□□□ -1.58
CNTN3Q9P232 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.19□□□□□ -1.58
CNTN3Q9P232 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.18□□□□□ -1.58
CNTN3Q9P232 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
CNTN3Q9P232 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.18□□□□□ -1.58
CNTN3Q9P232 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CNTN3Q9P232 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CNTN3Q9P232 AC138393.1-203ENST00000327086 343 ntBASIC5.18□□□□□ -1.58
CNTN3Q9P232 Y_RNA.288-201ENST00000364854 92 ntBASIC5.18□□□□□ -1.58
CNTN3Q9P232 MIR124-3-201ENST00000384866 87 ntBASIC5.18□□□□□ -1.58
CNTN3Q9P232 MIR298-201ENST00000401212 88 ntBASIC5.18□□□□□ -1.58
CNTN3Q9P232 RNU6ATAC23P-201ENST00000408448 123 ntBASIC5.18□□□□□ -1.58
CNTN3Q9P232 SYF2P2-201ENST00000417620 583 ntBASIC5.18□□□□□ -1.58
CNTN3Q9P232 RPL7P2-201ENST00000427639 268 ntBASIC5.18□□□□□ -1.58
CNTN3Q9P232 HMGB1P27-201ENST00000431429 603 ntBASIC5.18□□□□□ -1.58
CNTN3Q9P232 AC073063.1-201ENST00000434352 607 ntBASIC5.18□□□□□ -1.58
CNTN3Q9P232 AC016831.4-201ENST00000438302 307 ntBASIC5.18□□□□□ -1.58
CNTN3Q9P232 H2AFZP5-201ENST00000446960 382 ntBASIC5.18□□□□□ -1.58
CNTN3Q9P232 PCNPP5-201ENST00000452246 481 ntBASIC5.18□□□□□ -1.58
CNTN3Q9P232 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC5.18□□□□□ -1.58
CNTN3Q9P232 PCMTD1P1-201ENST00000455560 355 ntBASIC5.18□□□□□ -1.58
CNTN3Q9P232 RNU7-187P-201ENST00000458985 68 ntBASIC5.18□□□□□ -1.58
CNTN3Q9P232 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC5.18□□□□□ -1.58
CNTN3Q9P232 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CNTN3Q9P232 NIP7P2-201ENST00000485801 544 ntBASIC5.18□□□□□ -1.58
CNTN3Q9P232 RPL17P19-201ENST00000489069 552 ntBASIC5.18□□□□□ -1.58
CNTN3Q9P232 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
CNTN3Q9P232 AC091868.1-201ENST00000508746 304 ntBASIC5.18□□□□□ -1.58
CNTN3Q9P232 RNU1-6P-201ENST00000516290 144 ntBASIC5.18□□□□□ -1.58
CNTN3Q9P232 SNORA40.14-201ENST00000516543 86 ntBASIC5.18□□□□□ -1.58
CNTN3Q9P232 RNU4-60P-201ENST00000517239 135 ntBASIC5.18□□□□□ -1.58
CNTN3Q9P232 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC5.18□□□□□ -1.58
CNTN3Q9P232 AC005868.1-201ENST00000536421 331 ntBASIC5.18□□□□□ -1.58
CNTN3Q9P232 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC5.18□□□□□ -1.58
CNTN3Q9P232 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC5.18□□□□□ -1.58
CNTN3Q9P232 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC5.18□□□□□ -1.58
CNTN3Q9P232 AL110118.1-201ENST00000553543 400 ntBASIC5.18□□□□□ -1.58
CNTN3Q9P232 RN7SL435P-201ENST00000584418 282 ntBASIC5.18□□□□□ -1.58
CNTN3Q9P232 AC234771.5-201ENST00000600161 514 ntBASIC5.18□□□□□ -1.58
CNTN3Q9P232 AC012669.1-201ENST00000603209 283 ntBASIC5.18□□□□□ -1.58
CNTN3Q9P232 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
CNTN3Q9P232 MAPK10-263ENST00000641052 4307 ntBASIC5.18□□□□□ -1.58
CNTN3Q9P232 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CNTN3Q9P232 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
CNTN3Q9P232 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
CNTN3Q9P232 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
CNTN3Q9P232 AP001642.1-201ENST00000624727 2117 ntBASIC5.18□□□□□ -1.58
CNTN3Q9P232 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.18□□□□□ -1.58
CNTN3Q9P232 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC5.18□□□□□ -1.58
CNTN3Q9P232 AC112198.2-201ENST00000426589 6996 ntBASIC5.17□□□□□ -1.58
CNTN3Q9P232 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 160.8 ms