RNA–Protein interactions for RNA: ENST00000541871.1

CACNA1C-IT2-201, CACNA1C intronic transcript 2, humanhuman

TSL 2 BASIC

Gene CACNA1C-IT2, Length 589 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-IT2-201ENST00000541871 AEBP2Q6ZN18 517 aaPredicted RBP19.17■□□□□ 0.66
CACNA1C-IT2-201ENST00000541871 CHIC1Q5VXU3 224 aa18.15■□□□□ 0.5
CACNA1C-IT2-201ENST00000541871 SENP3Q9H4L4 574 aaPredicted RBP16.44■□□□□ 0.22
CACNA1C-IT2-201ENST00000541871 PHF23Q9BUL5 403 aaPredicted RBP16.18■□□□□ 0.18
CACNA1C-IT2-201ENST00000541871 FOXD1Q16676 465 aa15.29■□□□□ 0.04
CACNA1C-IT2-201ENST00000541871 PLPPR3Q6T4P5 718 aa14.47□□□□□ -0.09
CACNA1C-IT2-201ENST00000541871 MSH5O43196 834 aa14.4□□□□□ -0.1
CACNA1C-IT2-201ENST00000541871 PIAS4Q8N2W9 510 aaPredicted RBP14.28□□□□□ -0.12
CACNA1C-IT2-201ENST00000541871 POTEDQ86YR6 584 aa14.19□□□□□ -0.14
CACNA1C-IT2-201ENST00000541871 PPP6R1Q9UPN7 881 aa14.19□□□□□ -0.14
CACNA1C-IT2-201ENST00000541871 ADRA2BP18089 450 aa14.14□□□□□ -0.15
CACNA1C-IT2-201ENST00000541871 SCAF1Q9H7N4 1312 aaKnown RBP13.02□□□□□ -0.33
CACNA1C-IT2-201ENST00000541871 MAPK8IP2Q13387 824 aaPredicted RBP13.01□□□□□ -0.33
CACNA1C-IT2-201ENST00000541871 DMRT2Q9Y5R5 561 aa13.01□□□□□ -0.33
CACNA1C-IT2-201ENST00000541871 PPP4R3CPQ6ZMV5 832 aa12.65□□□□□ -0.38
CACNA1C-IT2-201ENST00000541871 HOXD11P31277 338 aaPredicted RBP12.49□□□□□ -0.41
CACNA1C-IT2-201ENST00000541871 DCAF8L1A6NGE4 600 aa12.46□□□□□ -0.41
CACNA1C-IT2-201ENST00000541871 CNKSR2Q8WXI2 1034 aa12.46□□□□□ -0.41
CACNA1C-IT2-201ENST00000541871 CACNB1Q02641 598 aaPredicted RBP12.4□□□□□ -0.42
CACNA1C-IT2-201ENST00000541871 RNF216Q9NWF9 866 aaPredicted RBP12.37□□□□□ -0.43
CACNA1C-IT2-201ENST00000541871 RNF39Q9H2S5 420 aa12.25□□□□□ -0.45
CACNA1C-IT2-201ENST00000541871 NCBP3Q53F19 620 aaKnown RBP12.17□□□□□ -0.46
CACNA1C-IT2-201ENST00000541871 DNAJC5BQ9UF47 199 aa12.13□□□□□ -0.47
CACNA1C-IT2-201ENST00000541871 C1QBPQ07021 282 aaKnown RBP12.1□□□□□ -0.47
CACNA1C-IT2-201ENST00000541871 NPM3O75607 178 aaKnown RBP11.94□□□□□ -0.5
CACNA1C-IT2-201ENST00000541871 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.89□□□□□ -0.51
CACNA1C-IT2-201ENST00000541871 U3KPZ7 1027 aaPredicted RBP11.61□□□□□ -0.55
CACNA1C-IT2-201ENST00000541871 KCNA4P22459 653 aa11.6□□□□□ -0.55
CACNA1C-IT2-201ENST00000541871 CAPN15O75808 1086 aa11.47□□□□□ -0.57
CACNA1C-IT2-201ENST00000541871 SPINK5Q9NQ38 1064 aaPredicted RBP11.46□□□□□ -0.57
CACNA1C-IT2-201ENST00000541871 SLC4A2P04920 1241 aa11.43□□□□□ -0.58
CACNA1C-IT2-201ENST00000541871 DSG3P32926 999 aa11.43□□□□□ -0.58
CACNA1C-IT2-201ENST00000541871 APLP2Q06481 763 aa11.35□□□□□ -0.59
CACNA1C-IT2-201ENST00000541871 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.31□□□□□ -0.6
CACNA1C-IT2-201ENST00000541871 HNRNPUL2Q1KMD3 747 aaKnown RBP11.31□□□□□ -0.6
CACNA1C-IT2-201ENST00000541871 ZNF219Q9P2Y4 722 aaPredicted RBP11.27□□□□□ -0.61
CACNA1C-IT2-201ENST00000541871 TRHP20396 242 aaPredicted RBP11.25□□□□□ -0.61
CACNA1C-IT2-201ENST00000541871 SAMD1Q6SPF0 538 aaPredicted RBP11.22□□□□□ -0.61
CACNA1C-IT2-201ENST00000541871 ABCB7O75027 752 aa11.17□□□□□ -0.62
CACNA1C-IT2-201ENST00000541871 POTEHQ6S545 545 aa11.12□□□□□ -0.63
CACNA1C-IT2-201ENST00000541871 MYCNP04198 464 aaPredicted RBP11.08□□□□□ -0.64
CACNA1C-IT2-201ENST00000541871 RBM42Q9BTD8 480 aaKnown RBP10.96□□□□□ -0.65
CACNA1C-IT2-201ENST00000541871 SLC4A1APQ9BWU0 796 aaKnown RBP10.95□□□□□ -0.66
CACNA1C-IT2-201ENST00000541871 POLA2Q14181 598 aa10.93□□□□□ -0.66
CACNA1C-IT2-201ENST00000541871 FOXD4L1Q9NU39 408 aa10.9□□□□□ -0.66
CACNA1C-IT2-201ENST00000541871 ATF5Q9Y2D1 282 aaPredicted RBP10.77□□□□□ -0.69
CACNA1C-IT2-201ENST00000541871 ZBTB12Q9Y330 459 aaPredicted RBP10.75□□□□□ -0.69
CACNA1C-IT2-201ENST00000541871 CHRDL2Q6WN34 429 aa10.72□□□□□ -0.69
CACNA1C-IT2-201ENST00000541871 AKT1S1Q96B36 256 aa10.67□□□□□ -0.7
CACNA1C-IT2-201ENST00000541871 ZBTB22O15209 634 aa10.64□□□□□ -0.71
CACNA1C-IT2-201ENST00000541871 ATXN8OSP0DMR3 200 aa10.6□□□□□ -0.71
CACNA1C-IT2-201ENST00000541871 OSCARQ8IYS5 282 aa10.57□□□□□ -0.72
CACNA1C-IT2-201ENST00000541871 REM2Q8IYK8 340 aaPredicted RBP10.54□□□□□ -0.72
CACNA1C-IT2-201ENST00000541871 FBLN2P98095 1184 aa10.43□□□□□ -0.74
CACNA1C-IT2-201ENST00000541871 PIP4P2Q8N4L2 257 aa10.43□□□□□ -0.74
CACNA1C-IT2-201ENST00000541871 PITPNM1O00562 1244 aa10.42□□□□□ -0.74
CACNA1C-IT2-201ENST00000541871 SPDYE2BA6NHP3 402 aa10.4□□□□□ -0.74
CACNA1C-IT2-201ENST00000541871 SPDYE6P0CI01 402 aa10.4□□□□□ -0.74
CACNA1C-IT2-201ENST00000541871 SPDYE2Q495Y8 402 aa10.4□□□□□ -0.74
CACNA1C-IT2-201ENST00000541871 FXR2P51116 673 aaKnown RBP eCLIP10.37□□□□□ -0.75
CACNA1C-IT2-201ENST00000541871 SP7Q8TDD2 431 aaPredicted RBP10.37□□□□□ -0.75
CACNA1C-IT2-201ENST00000541871 HAX1O00165 279 aa10.28□□□□□ -0.76
CACNA1C-IT2-201ENST00000541871 MKRN4PQ13434 485 aaPredicted RBP10.28□□□□□ -0.76
CACNA1C-IT2-201ENST00000541871 SPDYE1Q8NFV5 336 aaPredicted RBP10.25□□□□□ -0.77
CACNA1C-IT2-201ENST00000541871 ZNF692Q9BU19 519 aaPredicted RBP10.24□□□□□ -0.77
CACNA1C-IT2-201ENST00000541871 SSUH2Q9Y2M2 353 aa10.23□□□□□ -0.77
CACNA1C-IT2-201ENST00000541871 CLEC11AQ9Y240 323 aa10.2□□□□□ -0.78
CACNA1C-IT2-201ENST00000541871 PRKAR2AP13861 404 aaKnown RBP10.16□□□□□ -0.78
CACNA1C-IT2-201ENST00000541871 EVX2Q03828 476 aa10.1□□□□□ -0.79
CACNA1C-IT2-201ENST00000541871 CSRNP3Q8WYN3 585 aa10.08□□□□□ -0.8
CACNA1C-IT2-201ENST00000541871 PABPN1Q86U42 306 aaKnown RBP eCLIP10.07□□□□□ -0.8
CACNA1C-IT2-201ENST00000541871 C19orf67A6NJJ6 358 aa10.04□□□□□ -0.8
CACNA1C-IT2-201ENST00000541871 PRR29P0C7W0 189 aa10.04□□□□□ -0.8
CACNA1C-IT2-201ENST00000541871 CHADLQ6NUI6 762 aa9.99□□□□□ -0.81
CACNA1C-IT2-201ENST00000541871 GABBR2O75899 941 aa9.9□□□□□ -0.82
CACNA1C-IT2-201ENST00000541871 FARP1Q9Y4F1 1045 aaPredicted RBP9.87□□□□□ -0.83
CACNA1C-IT2-201ENST00000541871 EHMT2Q96KQ7 1210 aa9.86□□□□□ -0.83
CACNA1C-IT2-201ENST00000541871 CD44P16070 742 aaKnown RBP9.83□□□□□ -0.84
CACNA1C-IT2-201ENST00000541871 STAG3Q9UJ98 1225 aa9.82□□□□□ -0.84
CACNA1C-IT2-201ENST00000541871 CLCN6P51797 869 aa9.8□□□□□ -0.84
CACNA1C-IT2-201ENST00000541871 SPDYE4A6NLX3 237 aa9.77□□□□□ -0.85
CACNA1C-IT2-201ENST00000541871 LHX8Q68G74 356 aa9.73□□□□□ -0.85
CACNA1C-IT2-201ENST00000541871 CREBZFQ9NS37 354 aa9.73□□□□□ -0.85
CACNA1C-IT2-201ENST00000541871 ZNF579Q8NAF0 562 aaKnown RBP9.69□□□□□ -0.86
CACNA1C-IT2-201ENST00000541871 ZRANB1Q9UGI0 708 aa9.68□□□□□ -0.86
CACNA1C-IT2-201ENST00000541871 POTEIP0CG38 1075 aa9.67□□□□□ -0.86
CACNA1C-IT2-201ENST00000541871 DCBLD2Q96PD2 775 aa9.64□□□□□ -0.87
CACNA1C-IT2-201ENST00000541871 PAK3O75914 559 aaPredicted RBP9.61□□□□□ -0.87
CACNA1C-IT2-201ENST00000541871 NPM1P06748 294 aaKnown RBP eCLIP9.6□□□□□ -0.87
CACNA1C-IT2-201ENST00000541871 GALR2O43603 387 aaPredicted RBP9.55□□□□□ -0.88
CACNA1C-IT2-201ENST00000541871 MNX1P50219 401 aaPredicted RBP9.55□□□□□ -0.88
CACNA1C-IT2-201ENST00000541871 PROM2Q8N271 834 aa9.52□□□□□ -0.89
CACNA1C-IT2-201ENST00000541871 PHF12Q96QT6 1004 aa9.51□□□□□ -0.89
CACNA1C-IT2-201ENST00000541871 PLEKHG5O94827 1062 aa9.39□□□□□ -0.91
CACNA1C-IT2-201ENST00000541871 MS4A3Q96HJ5 214 aa9.39□□□□□ -0.91
CACNA1C-IT2-201ENST00000541871 TSPYL2Q9H2G4 693 aaPredicted RBP9.38□□□□□ -0.91
CACNA1C-IT2-201ENST00000541871 ASTLQ6HA08 431 aaPredicted RBP9.36□□□□□ -0.91
CACNA1C-IT2-201ENST00000541871 PELP1Q8IZL8 1130 aaKnown RBP9.36□□□□□ -0.91
CACNA1C-IT2-201ENST00000541871 POTEB2H3BUK9 544 aa9.35□□□□□ -0.91
CACNA1C-IT2-201ENST00000541871 OTUD5Q96G74 571 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms