RNA–Protein interactions for RNA: ENST00000516543.1

SNORA40.14-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 86 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.14-201ENST00000516543 AEBP2Q6ZN18 517 aaPredicted RBP17.88■□□□□ 0.45
SNORA40.14-201ENST00000516543 CHIC1Q5VXU3 224 aa16.98■□□□□ 0.31
SNORA40.14-201ENST00000516543 SENP3Q9H4L4 574 aaPredicted RBP15.11■□□□□ 0.01
SNORA40.14-201ENST00000516543 PHF23Q9BUL5 403 aaPredicted RBP15□□□□□ -0.01
SNORA40.14-201ENST00000516543 FOXD1Q16676 465 aa14.17□□□□□ -0.14
SNORA40.14-201ENST00000516543 PLPPR3Q6T4P5 718 aa13.56□□□□□ -0.24
SNORA40.14-201ENST00000516543 PPP6R1Q9UPN7 881 aa13.36□□□□□ -0.27
SNORA40.14-201ENST00000516543 ADRA2BP18089 450 aa13.3□□□□□ -0.28
SNORA40.14-201ENST00000516543 PIAS4Q8N2W9 510 aaPredicted RBP13.23□□□□□ -0.29
SNORA40.14-201ENST00000516543 MSH5O43196 834 aa13.12□□□□□ -0.31
SNORA40.14-201ENST00000516543 POTEDQ86YR6 584 aa12.76□□□□□ -0.37
SNORA40.14-201ENST00000516543 MAPK8IP2Q13387 824 aaPredicted RBP12.22□□□□□ -0.45
SNORA40.14-201ENST00000516543 DMRT2Q9Y5R5 561 aa12.03□□□□□ -0.48
SNORA40.14-201ENST00000516543 SCAF1Q9H7N4 1312 aaKnown RBP12.02□□□□□ -0.49
SNORA40.14-201ENST00000516543 PPP4R3CPQ6ZMV5 832 aa11.95□□□□□ -0.5
SNORA40.14-201ENST00000516543 CNKSR2Q8WXI2 1034 aa11.66□□□□□ -0.54
SNORA40.14-201ENST00000516543 HOXD11P31277 338 aaPredicted RBP11.62□□□□□ -0.55
SNORA40.14-201ENST00000516543 DCAF8L1A6NGE4 600 aa11.56□□□□□ -0.56
SNORA40.14-201ENST00000516543 RNF216Q9NWF9 866 aaPredicted RBP11.53□□□□□ -0.56
SNORA40.14-201ENST00000516543 NCBP3Q53F19 620 aaKnown RBP11.42□□□□□ -0.58
SNORA40.14-201ENST00000516543 NPM3O75607 178 aaKnown RBP11.37□□□□□ -0.59
SNORA40.14-201ENST00000516543 CACNB1Q02641 598 aaPredicted RBP11.26□□□□□ -0.61
SNORA40.14-201ENST00000516543 RNF39Q9H2S5 420 aa11.26□□□□□ -0.61
SNORA40.14-201ENST00000516543 KCNA4P22459 653 aa11.25□□□□□ -0.61
SNORA40.14-201ENST00000516543 DNAJC5BQ9UF47 199 aa11.11□□□□□ -0.63
SNORA40.14-201ENST00000516543 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.06□□□□□ -0.64
SNORA40.14-201ENST00000516543 C1QBPQ07021 282 aaKnown RBP11.05□□□□□ -0.64
SNORA40.14-201ENST00000516543 U3KPZ7 1027 aaPredicted RBP10.89□□□□□ -0.67
SNORA40.14-201ENST00000516543 SLC4A2P04920 1241 aa10.86□□□□□ -0.67
SNORA40.14-201ENST00000516543 SPINK5Q9NQ38 1064 aaPredicted RBP10.74□□□□□ -0.69
SNORA40.14-201ENST00000516543 CAPN15O75808 1086 aa10.66□□□□□ -0.7
SNORA40.14-201ENST00000516543 DSG3P32926 999 aa10.59□□□□□ -0.71
SNORA40.14-201ENST00000516543 SLC4A1APQ9BWU0 796 aaKnown RBP10.58□□□□□ -0.72
SNORA40.14-201ENST00000516543 TRHP20396 242 aaPredicted RBP10.52□□□□□ -0.73
SNORA40.14-201ENST00000516543 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.47□□□□□ -0.73
SNORA40.14-201ENST00000516543 ABCB7O75027 752 aa10.47□□□□□ -0.73
SNORA40.14-201ENST00000516543 HNRNPUL2Q1KMD3 747 aaKnown RBP10.47□□□□□ -0.73
SNORA40.14-201ENST00000516543 SAMD1Q6SPF0 538 aaPredicted RBP10.45□□□□□ -0.74
SNORA40.14-201ENST00000516543 MYCNP04198 464 aaPredicted RBP10.44□□□□□ -0.74
SNORA40.14-201ENST00000516543 APLP2Q06481 763 aa10.43□□□□□ -0.74
SNORA40.14-201ENST00000516543 ZNF219Q9P2Y4 722 aaPredicted RBP10.42□□□□□ -0.74
SNORA40.14-201ENST00000516543 FOXD4L1Q9NU39 408 aa10.4□□□□□ -0.74
SNORA40.14-201ENST00000516543 ZBTB22O15209 634 aa10.38□□□□□ -0.75
SNORA40.14-201ENST00000516543 ATF5Q9Y2D1 282 aaPredicted RBP10.32□□□□□ -0.76
SNORA40.14-201ENST00000516543 POLA2Q14181 598 aa10.26□□□□□ -0.77
SNORA40.14-201ENST00000516543 ATXN8OSP0DMR3 200 aa10.01□□□□□ -0.81
SNORA40.14-201ENST00000516543 POTEHQ6S545 545 aa10□□□□□ -0.81
SNORA40.14-201ENST00000516543 RBM42Q9BTD8 480 aaKnown RBP10□□□□□ -0.81
SNORA40.14-201ENST00000516543 CSRNP3Q8WYN3 585 aa9.95□□□□□ -0.82
SNORA40.14-201ENST00000516543 OSCARQ8IYS5 282 aa9.94□□□□□ -0.82
SNORA40.14-201ENST00000516543 ZBTB12Q9Y330 459 aaPredicted RBP9.93□□□□□ -0.82
SNORA40.14-201ENST00000516543 EHMT2Q96KQ7 1210 aa9.87□□□□□ -0.83
SNORA40.14-201ENST00000516543 MKRN4PQ13434 485 aaPredicted RBP9.83□□□□□ -0.84
SNORA40.14-201ENST00000516543 CHRDL2Q6WN34 429 aa9.83□□□□□ -0.84
SNORA40.14-201ENST00000516543 AKT1S1Q96B36 256 aa9.83□□□□□ -0.84
SNORA40.14-201ENST00000516543 REM2Q8IYK8 340 aaPredicted RBP9.78□□□□□ -0.84
SNORA40.14-201ENST00000516543 FBLN2P98095 1184 aa9.77□□□□□ -0.85
SNORA40.14-201ENST00000516543 SPDYE2BA6NHP3 402 aa9.69□□□□□ -0.86
SNORA40.14-201ENST00000516543 PITPNM1O00562 1244 aa9.69□□□□□ -0.86
SNORA40.14-201ENST00000516543 SPDYE6P0CI01 402 aa9.69□□□□□ -0.86
SNORA40.14-201ENST00000516543 SPDYE2Q495Y8 402 aa9.69□□□□□ -0.86
SNORA40.14-201ENST00000516543 PIP4P2Q8N4L2 257 aa9.63□□□□□ -0.87
SNORA40.14-201ENST00000516543 ZNF692Q9BU19 519 aaPredicted RBP9.62□□□□□ -0.87
SNORA40.14-201ENST00000516543 SSUH2Q9Y2M2 353 aa9.61□□□□□ -0.87
SNORA40.14-201ENST00000516543 FXR2P51116 673 aaKnown RBP eCLIP9.57□□□□□ -0.88
SNORA40.14-201ENST00000516543 CLEC11AQ9Y240 323 aa9.54□□□□□ -0.88
SNORA40.14-201ENST00000516543 PABPN1Q86U42 306 aaKnown RBP eCLIP9.5□□□□□ -0.89
SNORA40.14-201ENST00000516543 SPDYE1Q8NFV5 336 aaPredicted RBP9.5□□□□□ -0.89
SNORA40.14-201ENST00000516543 PRKAR2AP13861 404 aaKnown RBP9.43□□□□□ -0.9
SNORA40.14-201ENST00000516543 HAX1O00165 279 aa9.42□□□□□ -0.9
SNORA40.14-201ENST00000516543 EVX2Q03828 476 aa9.41□□□□□ -0.9
SNORA40.14-201ENST00000516543 CHADLQ6NUI6 762 aa9.4□□□□□ -0.9
SNORA40.14-201ENST00000516543 SP7Q8TDD2 431 aaPredicted RBP9.39□□□□□ -0.91
SNORA40.14-201ENST00000516543 PRR29P0C7W0 189 aa9.36□□□□□ -0.91
SNORA40.14-201ENST00000516543 SPDYE4A6NLX3 237 aa9.34□□□□□ -0.91
SNORA40.14-201ENST00000516543 C19orf67A6NJJ6 358 aa9.26□□□□□ -0.93
SNORA40.14-201ENST00000516543 FARP1Q9Y4F1 1045 aaPredicted RBP9.21□□□□□ -0.94
SNORA40.14-201ENST00000516543 CREBZFQ9NS37 354 aa9.19□□□□□ -0.94
SNORA40.14-201ENST00000516543 STAG3Q9UJ98 1225 aa9.17□□□□□ -0.94
SNORA40.14-201ENST00000516543 CD44P16070 742 aaKnown RBP9.13□□□□□ -0.95
SNORA40.14-201ENST00000516543 PROM2Q8N271 834 aa9.13□□□□□ -0.95
SNORA40.14-201ENST00000516543 GABBR2O75899 941 aa9.12□□□□□ -0.95
SNORA40.14-201ENST00000516543 MNX1P50219 401 aaPredicted RBP9.06□□□□□ -0.96
SNORA40.14-201ENST00000516543 ZRANB1Q9UGI0 708 aa9.02□□□□□ -0.97
SNORA40.14-201ENST00000516543 FKBP8Q14318 412 aa8.99□□□□□ -0.97
SNORA40.14-201ENST00000516543 POTEIP0CG38 1075 aa8.98□□□□□ -0.97
SNORA40.14-201ENST00000516543 ZNF579Q8NAF0 562 aaKnown RBP8.97□□□□□ -0.97
SNORA40.14-201ENST00000516543 PHF12Q96QT6 1004 aa8.94□□□□□ -0.98
SNORA40.14-201ENST00000516543 NPM1P06748 294 aaKnown RBP eCLIP8.93□□□□□ -0.98
SNORA40.14-201ENST00000516543 GALR2O43603 387 aaPredicted RBP8.92□□□□□ -0.98
SNORA40.14-201ENST00000516543 MIER1Q8N108 512 aa8.91□□□□□ -0.98
SNORA40.14-201ENST00000516543 PAK3O75914 559 aaPredicted RBP8.88□□□□□ -0.99
SNORA40.14-201ENST00000516543 TSPYL2Q9H2G4 693 aaPredicted RBP8.87□□□□□ -0.99
SNORA40.14-201ENST00000516543 CLCN6P51797 869 aa8.85□□□□□ -0.99
SNORA40.14-201ENST00000516543 DCBLD2Q96PD2 775 aa8.85□□□□□ -0.99
SNORA40.14-201ENST00000516543 PLCD3Q8N3E9 789 aa8.83□□□□□ -1
SNORA40.14-201ENST00000516543 LHX8Q68G74 356 aa8.82□□□□□ -1
SNORA40.14-201ENST00000516543 RASEFQ8IZ41 740 aa8.82□□□□□ -1
SNORA40.14-201ENST00000516543 MS4A3Q96HJ5 214 aa8.81□□□□□ -1
SNORA40.14-201ENST00000516543 CCDC61Q9Y6R9 512 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms