Protein–RNA interactions for Protein: Q9BYQ6

KRTAP4-11, Keratin-associated protein 4-11, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-11Q9BYQ6 DCTN1-205ENST00000409567 4024 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
KRTAP4-11Q9BYQ6 PFKM-210ENST00000547587 2867 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
KRTAP4-11Q9BYQ6 L3MBTL3-202ENST00000368136 4235 ntAPPRIS P4 TSL 5 BASIC2.17□□□□□ -2.06
KRTAP4-11Q9BYQ6 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
KRTAP4-11Q9BYQ6 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
KRTAP4-11Q9BYQ6 DDX3X-217ENST00000629496 5023 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
KRTAP4-11Q9BYQ6 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
KRTAP4-11Q9BYQ6 DDR1-AS1-206ENST00000458361 3994 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
KRTAP4-11Q9BYQ6 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
KRTAP4-11Q9BYQ6 PHF19-214ENST00000616568 4159 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
KRTAP4-11Q9BYQ6 SPTAN1-201ENST00000358161 7794 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
KRTAP4-11Q9BYQ6 MYO1H-201ENST00000310903 4364 ntTSL 5 BASIC2.17□□□□□ -2.06
KRTAP4-11Q9BYQ6 IGSF1-201ENST00000361420 4378 ntAPPRIS P3 TSL 1 (best) BASIC2.17□□□□□ -2.06
KRTAP4-11Q9BYQ6 NOP2-202ENST00000382421 2736 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
KRTAP4-11Q9BYQ6 HNRNPK-205ENST00000376281 2928 ntAPPRIS P4 TSL 1 (best) BASIC2.17□□□□□ -2.06
KRTAP4-11Q9BYQ6 MADD-205ENST00000395344 4988 ntAPPRIS ALT2 TSL 2 BASIC2.17□□□□□ -2.06
KRTAP4-11Q9BYQ6 TMEM87A-202ENST00000389834 3109 ntAPPRIS P1 TSL 2 BASIC2.17□□□□□ -2.06
KRTAP4-11Q9BYQ6 ATP8A2-204ENST00000381655 9575 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
KRTAP4-11Q9BYQ6 DEPDC5-206ENST00000400249 5458 ntTSL 5 BASIC2.17□□□□□ -2.06
KRTAP4-11Q9BYQ6 EXOC7-202ENST00000335146 3519 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
KRTAP4-11Q9BYQ6 AL079307.1-201ENST00000553312 5982 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
KRTAP4-11Q9BYQ6 AL121832.3-201ENST00000616512 3700 ntBASIC2.17□□□□□ -2.06
KRTAP4-11Q9BYQ6 RNA5SP448-201ENST00000363151 111 ntBASIC2.17□□□□□ -2.06
KRTAP4-11Q9BYQ6 RNU6-1039P-201ENST00000383931 107 ntBASIC2.17□□□□□ -2.06
KRTAP4-11Q9BYQ6 RNU6-1162P-201ENST00000384443 104 ntBASIC2.17□□□□□ -2.06
KRTAP4-11Q9BYQ6 SNORA41B-201ENST00000384785 128 ntBASIC2.17□□□□□ -2.06
KRTAP4-11Q9BYQ6 MIR636-201ENST00000384825 99 ntBASIC2.17□□□□□ -2.06
KRTAP4-11Q9BYQ6 HMGN2P39-201ENST00000398005 273 ntBASIC2.17□□□□□ -2.06
KRTAP4-11Q9BYQ6 AL033519.1-201ENST00000407266 307 ntBASIC2.17□□□□□ -2.06
KRTAP4-11Q9BYQ6 AL139247.1-201ENST00000422768 325 ntBASIC2.17□□□□□ -2.06
KRTAP4-11Q9BYQ6 AC008065.1-201ENST00000428525 348 ntBASIC2.17□□□□□ -2.06
KRTAP4-11Q9BYQ6 FTLP19-201ENST00000433300 394 ntBASIC2.17□□□□□ -2.06
KRTAP4-11Q9BYQ6 ERVMER34-1-202ENST00000443173 3830 ntAPPRIS P1 TSL 3 BASIC2.17□□□□□ -2.06
KRTAP4-11Q9BYQ6 PPIAP20-201ENST00000449839 135 ntBASIC2.17□□□□□ -2.06
KRTAP4-11Q9BYQ6 SDC4P-201ENST00000453285 601 ntBASIC2.17□□□□□ -2.06
KRTAP4-11Q9BYQ6 AC112719.1-201ENST00000477971 315 ntBASIC2.17□□□□□ -2.06
KRTAP4-11Q9BYQ6 AL035690.1-201ENST00000490892 383 ntBASIC2.17□□□□□ -2.06
KRTAP4-11Q9BYQ6 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC2.17□□□□□ -2.06
KRTAP4-11Q9BYQ6 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC2.17□□□□□ -2.06
KRTAP4-11Q9BYQ6 RNU6-656P-201ENST00000516785 107 ntBASIC2.17□□□□□ -2.06
KRTAP4-11Q9BYQ6 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC2.17□□□□□ -2.06
KRTAP4-11Q9BYQ6 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.17□□□□□ -2.06
KRTAP4-11Q9BYQ6 CYCSP40-201ENST00000575927 294 ntBASIC2.17□□□□□ -2.06
KRTAP4-11Q9BYQ6 UBL5P2-201ENST00000583788 219 ntBASIC2.17□□□□□ -2.06
KRTAP4-11Q9BYQ6 AP001017.1-201ENST00000591378 482 ntBASIC2.17□□□□□ -2.06
KRTAP4-11Q9BYQ6 AC005070.2-201ENST00000604391 260 ntBASIC2.17□□□□□ -2.06
KRTAP4-11Q9BYQ6 AL591926.1-201ENST00000620542 217 ntBASIC2.17□□□□□ -2.06
KRTAP4-11Q9BYQ6 AC007318.2-201ENST00000620999 243 ntBASIC2.17□□□□□ -2.06
KRTAP4-11Q9BYQ6 AC211486.4-201ENST00000621495 113 ntBASIC2.17□□□□□ -2.06
KRTAP4-11Q9BYQ6 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC2.17□□□□□ -2.06
KRTAP4-11Q9BYQ6 ZFP30-202ENST00000392144 3916 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
KRTAP4-11Q9BYQ6 NEDD1-201ENST00000266742 4046 ntAPPRIS P1 TSL 2 BASIC2.17□□□□□ -2.06
KRTAP4-11Q9BYQ6 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC2.17□□□□□ -2.06
KRTAP4-11Q9BYQ6 MAMLD1-204ENST00000426613 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
KRTAP4-11Q9BYQ6 ZNF793-208ENST00000588578 4549 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
KRTAP4-11Q9BYQ6 KMT2A-213ENST00000534358 16602 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
KRTAP4-11Q9BYQ6 DNAJC18-201ENST00000302060 5103 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
KRTAP4-11Q9BYQ6 KCNA2-203ENST00000485317 2496 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
KRTAP4-11Q9BYQ6 FRMD7-201ENST00000298542 3198 ntAPPRIS P3 TSL 1 (best) BASIC2.17□□□□□ -2.06
KRTAP4-11Q9BYQ6 HHAT-207ENST00000541565 3164 ntTSL 2 BASIC2.17□□□□□ -2.06
KRTAP4-11Q9BYQ6 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC2.17□□□□□ -2.06
KRTAP4-11Q9BYQ6 CACNA2D4-221ENST00000586184 3499 ntAPPRIS ALT2 TSL 5 BASIC2.17□□□□□ -2.06
KRTAP4-11Q9BYQ6 LOXHD1-212ENST00000582408 3755 ntTSL 2 BASIC2.17□□□□□ -2.06
KRTAP4-11Q9BYQ6 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC2.17□□□□□ -2.06
KRTAP4-11Q9BYQ6 MRAS-210ENST00000614350 4377 ntTSL 2 BASIC2.17□□□□□ -2.06
KRTAP4-11Q9BYQ6 MAPK8-206ENST00000374189 5796 ntAPPRIS ALT1 TSL 5 BASIC2.17□□□□□ -2.06
KRTAP4-11Q9BYQ6 DOCK1-206ENST00000623213 5761 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
KRTAP4-11Q9BYQ6 LINC00963-202ENST00000419300 9557 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
KRTAP4-11Q9BYQ6 OSBPL6-204ENST00000359685 7114 ntTSL 5 BASIC2.17□□□□□ -2.06
KRTAP4-11Q9BYQ6 MET-202ENST00000397752 6635 ntAPPRIS P3 TSL 1 (best) BASIC2.17□□□□□ -2.06
KRTAP4-11Q9BYQ6 RNF41-212ENST00000615206 5216 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
KRTAP4-11Q9BYQ6 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC2.17□□□□□ -2.06
KRTAP4-11Q9BYQ6 CALML4-208ENST00000540479 4603 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
KRTAP4-11Q9BYQ6 CALML3-AS1-202ENST00000543008 4531 ntTSL 5 BASIC2.17□□□□□ -2.06
KRTAP4-11Q9BYQ6 ACLY-202ENST00000353196 4318 ntAPPRIS ALT1 TSL 5 BASIC2.17□□□□□ -2.06
KRTAP4-11Q9BYQ6 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
KRTAP4-11Q9BYQ6 MASP1-202ENST00000296280 4015 ntAPPRIS P4 TSL 1 (best) BASIC2.17□□□□□ -2.06
KRTAP4-11Q9BYQ6 IQSEC2-201ENST00000375365 4004 ntAPPRIS P3 TSL 1 (best) BASIC2.17□□□□□ -2.06
KRTAP4-11Q9BYQ6 METTL4-201ENST00000319888 3601 ntTSL 5 BASIC2.17□□□□□ -2.06
KRTAP4-11Q9BYQ6 AKAP3-206ENST00000545990 3318 ntAPPRIS P1 TSL 2 BASIC2.17□□□□□ -2.06
KRTAP4-11Q9BYQ6 SYNJ2-204ENST00000367122 3029 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
KRTAP4-11Q9BYQ6 SORBS2-206ENST00000393528 3043 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
KRTAP4-11Q9BYQ6 UBE2N-205ENST00000550657 3018 ntTSL 2 BASIC2.17□□□□□ -2.06
KRTAP4-11Q9BYQ6 SIGLEC8-201ENST00000321424 2949 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
KRTAP4-11Q9BYQ6 TRIM16-201ENST00000336708 2900 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
KRTAP4-11Q9BYQ6 ENSA-201ENST00000271690 2818 ntAPPRIS ALT1 TSL 1 (best) BASIC2.17□□□□□ -2.06
KRTAP4-11Q9BYQ6 RUNX1T1-248ENST00000613302 7687 ntAPPRIS P3 TSL 5 BASIC2.17□□□□□ -2.06
KRTAP4-11Q9BYQ6 ATF7-201ENST00000420353 6680 ntAPPRIS P2 TSL 1 (best) BASIC2.17□□□□□ -2.06
KRTAP4-11Q9BYQ6 DDHD1-203ENST00000395606 12769 ntAPPRIS ALT2 TSL 2 BASIC2.17□□□□□ -2.06
KRTAP4-11Q9BYQ6 SLC26A9-203ENST00000367135 4799 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
KRTAP4-11Q9BYQ6 ARHGEF9-234ENST00000637557 4775 ntTSL 5 BASIC2.17□□□□□ -2.06
KRTAP4-11Q9BYQ6 TNS1-209ENST00000446688 4292 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
KRTAP4-11Q9BYQ6 NOS2-201ENST00000313735 4176 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
KRTAP4-11Q9BYQ6 MPZL3-201ENST00000278949 3968 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
KRTAP4-11Q9BYQ6 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
KRTAP4-11Q9BYQ6 SRGAP2-203ENST00000573034 6301 ntAPPRIS P3 TSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP4-11Q9BYQ6 AC006504.1-201ENST00000562493 3666 ntBASIC2.16□□□□□ -2.06
KRTAP4-11Q9BYQ6 GABRP-203ENST00000518525 3576 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
KRTAP4-11Q9BYQ6 NUMB-214ENST00000555238 3588 ntAPPRIS ALT1 TSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP4-11Q9BYQ6 OGDH-207ENST00000449767 3479 ntAPPRIS ALT1 TSL 2 BASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 141.9 ms