RNA–Protein interactions for RNA: ENST00000398005.3

HMGN2P39-201, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 39, humanhuman

BASIC

Gene HMGN2P39, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P39-201ENST00000398005 AEBP2Q6ZN18 517 aaPredicted RBP8.19□□□□□ -1.1
HMGN2P39-201ENST00000398005 CHIC1Q5VXU3 224 aa7.65□□□□□ -1.18
HMGN2P39-201ENST00000398005 SENP3Q9H4L4 574 aaPredicted RBP6.94□□□□□ -1.3
HMGN2P39-201ENST00000398005 PHF23Q9BUL5 403 aaPredicted RBP6.87□□□□□ -1.31
HMGN2P39-201ENST00000398005 FOXD1Q16676 465 aa6.52□□□□□ -1.37
HMGN2P39-201ENST00000398005 POTEDQ86YR6 584 aa6.32□□□□□ -1.4
HMGN2P39-201ENST00000398005 MSH5O43196 834 aa6.1□□□□□ -1.43
HMGN2P39-201ENST00000398005 PLPPR3Q6T4P5 718 aa6.05□□□□□ -1.44
HMGN2P39-201ENST00000398005 PPP6R1Q9UPN7 881 aa6.05□□□□□ -1.44
HMGN2P39-201ENST00000398005 PIAS4Q8N2W9 510 aaPredicted RBP6.04□□□□□ -1.44
HMGN2P39-201ENST00000398005 ADRA2BP18089 450 aa6□□□□□ -1.45
HMGN2P39-201ENST00000398005 MAPK8IP2Q13387 824 aaPredicted RBP5.56□□□□□ -1.52
HMGN2P39-201ENST00000398005 DMRT2Q9Y5R5 561 aa5.5□□□□□ -1.53
HMGN2P39-201ENST00000398005 SCAF1Q9H7N4 1312 aaKnown RBP5.43□□□□□ -1.54
HMGN2P39-201ENST00000398005 CACNB1Q02641 598 aaPredicted RBP5.3□□□□□ -1.56
HMGN2P39-201ENST00000398005 PPP4R3CPQ6ZMV5 832 aa5.3□□□□□ -1.56
HMGN2P39-201ENST00000398005 HOXD11P31277 338 aaPredicted RBP5.27□□□□□ -1.57
HMGN2P39-201ENST00000398005 DCAF8L1A6NGE4 600 aa5.26□□□□□ -1.57
HMGN2P39-201ENST00000398005 CNKSR2Q8WXI2 1034 aa5.22□□□□□ -1.57
HMGN2P39-201ENST00000398005 RNF39Q9H2S5 420 aa5.22□□□□□ -1.57
HMGN2P39-201ENST00000398005 RNF216Q9NWF9 866 aaPredicted RBP5.2□□□□□ -1.58
HMGN2P39-201ENST00000398005 EHMT2Q96KQ7 1210 aa5.15□□□□□ -1.59
HMGN2P39-201ENST00000398005 C1QBPQ07021 282 aaKnown RBP5.11□□□□□ -1.59
HMGN2P39-201ENST00000398005 DNAJC5BQ9UF47 199 aa5.09□□□□□ -1.59
HMGN2P39-201ENST00000398005 NCBP3Q53F19 620 aaKnown RBP5.02□□□□□ -1.61
HMGN2P39-201ENST00000398005 NPM3O75607 178 aaKnown RBP5.01□□□□□ -1.61
HMGN2P39-201ENST00000398005 GRWD1Q9BQ67 446 aaKnown RBP eCLIP4.99□□□□□ -1.61
HMGN2P39-201ENST00000398005 KCNA4P22459 653 aa4.96□□□□□ -1.62
HMGN2P39-201ENST00000398005 U3KPZ7 1027 aaPredicted RBP4.91□□□□□ -1.62
HMGN2P39-201ENST00000398005 SPINK5Q9NQ38 1064 aaPredicted RBP4.88□□□□□ -1.63
HMGN2P39-201ENST00000398005 POTEHQ6S545 545 aa4.87□□□□□ -1.63
HMGN2P39-201ENST00000398005 SLC24A1O60721 1099 aa4.86□□□□□ -1.63
HMGN2P39-201ENST00000398005 DSG3P32926 999 aa4.86□□□□□ -1.63
HMGN2P39-201ENST00000398005 CSRNP3Q8WYN3 585 aa4.85□□□□□ -1.63
HMGN2P39-201ENST00000398005 CAPN15O75808 1086 aa4.84□□□□□ -1.63
HMGN2P39-201ENST00000398005 SLC4A2P04920 1241 aa4.82□□□□□ -1.64
HMGN2P39-201ENST00000398005 SLC4A1APQ9BWU0 796 aaKnown RBP4.81□□□□□ -1.64
HMGN2P39-201ENST00000398005 ABCB7O75027 752 aa4.74□□□□□ -1.65
HMGN2P39-201ENST00000398005 TRHP20396 242 aaPredicted RBP4.74□□□□□ -1.65
HMGN2P39-201ENST00000398005 ZNF219Q9P2Y4 722 aaPredicted RBP4.71□□□□□ -1.66
HMGN2P39-201ENST00000398005 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP4.68□□□□□ -1.66
HMGN2P39-201ENST00000398005 APLP2Q06481 763 aa4.68□□□□□ -1.66
HMGN2P39-201ENST00000398005 HNRNPUL2Q1KMD3 747 aaKnown RBP4.68□□□□□ -1.66
HMGN2P39-201ENST00000398005 AMER1Q5JTC6 1135 aaPredicted RBP4.67□□□□□ -1.66
HMGN2P39-201ENST00000398005 RTN4Q9NQC3 1192 aaKnown RBP4.67□□□□□ -1.66
HMGN2P39-201ENST00000398005 SAMD1Q6SPF0 538 aaPredicted RBP4.65□□□□□ -1.67
HMGN2P39-201ENST00000398005 POLA2Q14181 598 aa4.61□□□□□ -1.67
HMGN2P39-201ENST00000398005 MYCNP04198 464 aaPredicted RBP4.6□□□□□ -1.67
HMGN2P39-201ENST00000398005 RBM42Q9BTD8 480 aaKnown RBP4.59□□□□□ -1.67
HMGN2P39-201ENST00000398005 CHRDL2Q6WN34 429 aa4.56□□□□□ -1.68
HMGN2P39-201ENST00000398005 ATF5Q9Y2D1 282 aaPredicted RBP4.56□□□□□ -1.68
HMGN2P39-201ENST00000398005 ZBTB22O15209 634 aa4.55□□□□□ -1.68
HMGN2P39-201ENST00000398005 FOXD4L1Q9NU39 408 aa4.5□□□□□ -1.69
HMGN2P39-201ENST00000398005 AKT1S1Q96B36 256 aa4.49□□□□□ -1.69
HMGN2P39-201ENST00000398005 REM2Q8IYK8 340 aaPredicted RBP4.46□□□□□ -1.7
HMGN2P39-201ENST00000398005 OSCARQ8IYS5 282 aa4.46□□□□□ -1.7
HMGN2P39-201ENST00000398005 ZBTB12Q9Y330 459 aaPredicted RBP4.45□□□□□ -1.7
HMGN2P39-201ENST00000398005 PIP4P2Q8N4L2 257 aa4.44□□□□□ -1.7
HMGN2P39-201ENST00000398005 SP7Q8TDD2 431 aaPredicted RBP4.44□□□□□ -1.7
HMGN2P39-201ENST00000398005 PITPNM1O00562 1244 aa4.42□□□□□ -1.7
HMGN2P39-201ENST00000398005 FXR2P51116 673 aaKnown RBP eCLIP4.41□□□□□ -1.7
HMGN2P39-201ENST00000398005 FKBP8Q14318 412 aa4.4□□□□□ -1.71
HMGN2P39-201ENST00000398005 HAX1O00165 279 aa4.37□□□□□ -1.71
HMGN2P39-201ENST00000398005 ATXN8OSP0DMR3 200 aa4.37□□□□□ -1.71
HMGN2P39-201ENST00000398005 EVX2Q03828 476 aa4.37□□□□□ -1.71
HMGN2P39-201ENST00000398005 SPDYE2BA6NHP3 402 aa4.33□□□□□ -1.72
HMGN2P39-201ENST00000398005 SPDYE6P0CI01 402 aa4.33□□□□□ -1.72
HMGN2P39-201ENST00000398005 MKRN4PQ13434 485 aaPredicted RBP4.33□□□□□ -1.72
HMGN2P39-201ENST00000398005 SPDYE2Q495Y8 402 aa4.33□□□□□ -1.72
HMGN2P39-201ENST00000398005 FBLN2P98095 1184 aa4.31□□□□□ -1.72
HMGN2P39-201ENST00000398005 PRKAR2AP13861 404 aaKnown RBP4.29□□□□□ -1.72
HMGN2P39-201ENST00000398005 CLEC11AQ9Y240 323 aa4.29□□□□□ -1.72
HMGN2P39-201ENST00000398005 SSUH2Q9Y2M2 353 aa4.29□□□□□ -1.72
HMGN2P39-201ENST00000398005 PRKCSHP14314 528 aaPredicted RBP4.28□□□□□ -1.72
HMGN2P39-201ENST00000398005 PLCB2Q00722 1185 aa4.28□□□□□ -1.72
HMGN2P39-201ENST00000398005 ZNF692Q9BU19 519 aaPredicted RBP4.28□□□□□ -1.72
HMGN2P39-201ENST00000398005 C19orf67A6NJJ6 358 aa4.27□□□□□ -1.73
HMGN2P39-201ENST00000398005 HAP1P54257 671 aaPredicted RBP4.27□□□□□ -1.73
HMGN2P39-201ENST00000398005 SPDYE1Q8NFV5 336 aaPredicted RBP4.27□□□□□ -1.73
HMGN2P39-201ENST00000398005 BCANQ96GW7 911 aa4.27□□□□□ -1.73
HMGN2P39-201ENST00000398005 CHADLQ6NUI6 762 aa4.25□□□□□ -1.73
HMGN2P39-201ENST00000398005 TAOK2Q9UL54 1235 aa4.24□□□□□ -1.73
HMGN2P39-201ENST00000398005 GABBR2O75899 941 aa4.23□□□□□ -1.73
HMGN2P39-201ENST00000398005 PABPN1Q86U42 306 aaKnown RBP eCLIP4.22□□□□□ -1.73
HMGN2P39-201ENST00000398005 DCAF8L2P0C7V8 631 aa4.21□□□□□ -1.74
HMGN2P39-201ENST00000398005 PRR29P0C7W0 189 aa4.2□□□□□ -1.74
HMGN2P39-201ENST00000398005 TPRNQ4KMQ1 711 aa4.19□□□□□ -1.74
HMGN2P39-201ENST00000398005 POTEIP0CG38 1075 aa4.17□□□□□ -1.74
HMGN2P39-201ENST00000398005 LHX8Q68G74 356 aa4.17□□□□□ -1.74
HMGN2P39-201ENST00000398005 VSIG10Q8N0Z9 540 aa4.16□□□□□ -1.74
HMGN2P39-201ENST00000398005 FARP1Q9Y4F1 1045 aaPredicted RBP4.15□□□□□ -1.75
HMGN2P39-201ENST00000398005 CD44P16070 742 aaKnown RBP4.14□□□□□ -1.75
HMGN2P39-201ENST00000398005 FBXO3Q9UK99 471 aa4.13□□□□□ -1.75
HMGN2P39-201ENST00000398005 DAXXQ9UER7 740 aaPredicted RBP4.11□□□□□ -1.75
HMGN2P39-201ENST00000398005 CREBZFQ9NS37 354 aa4.1□□□□□ -1.75
HMGN2P39-201ENST00000398005 PLSCR2Q9NRY7 297 aa4.09□□□□□ -1.75
HMGN2P39-201ENST00000398005 CLCN6P51797 869 aa4.08□□□□□ -1.76
HMGN2P39-201ENST00000398005 ZNF579Q8NAF0 562 aaKnown RBP4.08□□□□□ -1.76
HMGN2P39-201ENST00000398005 ZBTB4Q9P1Z0 1013 aaPredicted RBP4.08□□□□□ -1.76
HMGN2P39-201ENST00000398005 TIMELESSQ9UNS1 1208 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms