RNA–Protein interactions for RNA: ENST00000398005.3

HMGN2P39-201, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 39, humanhuman

BASIC

Gene HMGN2P39, Length 273 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P39-201ENST00000398005 AEBP2Q6ZN18 517 aaPredicted RBP8.19□□□□□ -1.1
HMGN2P39-201ENST00000398005 CHIC1Q5VXU3 224 aa7.65□□□□□ -1.18
HMGN2P39-201ENST00000398005 SENP3Q9H4L4 574 aaPredicted RBP6.94□□□□□ -1.3
HMGN2P39-201ENST00000398005 PHF23Q9BUL5 403 aaPredicted RBP6.87□□□□□ -1.31
HMGN2P39-201ENST00000398005 FOXD1Q16676 465 aa6.52□□□□□ -1.37
HMGN2P39-201ENST00000398005 POTEDQ86YR6 584 aa6.32□□□□□ -1.4
HMGN2P39-201ENST00000398005 MSH5O43196 834 aa6.1□□□□□ -1.43
HMGN2P39-201ENST00000398005 PLPPR3Q6T4P5 718 aa6.05□□□□□ -1.44
HMGN2P39-201ENST00000398005 PPP6R1Q9UPN7 881 aa6.05□□□□□ -1.44
HMGN2P39-201ENST00000398005 PIAS4Q8N2W9 510 aaPredicted RBP6.04□□□□□ -1.44
HMGN2P39-201ENST00000398005 ADRA2BP18089 450 aa6□□□□□ -1.45
HMGN2P39-201ENST00000398005 MAPK8IP2Q13387 824 aaPredicted RBP5.56□□□□□ -1.52
HMGN2P39-201ENST00000398005 DMRT2Q9Y5R5 561 aa5.5□□□□□ -1.53
HMGN2P39-201ENST00000398005 SCAF1Q9H7N4 1312 aaKnown RBP5.43□□□□□ -1.54
HMGN2P39-201ENST00000398005 CACNB1Q02641 598 aaPredicted RBP5.3□□□□□ -1.56
HMGN2P39-201ENST00000398005 PPP4R3CPQ6ZMV5 832 aa5.3□□□□□ -1.56
HMGN2P39-201ENST00000398005 HOXD11P31277 338 aaPredicted RBP5.27□□□□□ -1.57
HMGN2P39-201ENST00000398005 DCAF8L1A6NGE4 600 aa5.26□□□□□ -1.57
HMGN2P39-201ENST00000398005 CNKSR2Q8WXI2 1034 aa5.22□□□□□ -1.57
HMGN2P39-201ENST00000398005 RNF39Q9H2S5 420 aa5.22□□□□□ -1.57
HMGN2P39-201ENST00000398005 RNF216Q9NWF9 866 aaPredicted RBP5.2□□□□□ -1.58
HMGN2P39-201ENST00000398005 EHMT2Q96KQ7 1210 aa5.15□□□□□ -1.59
HMGN2P39-201ENST00000398005 C1QBPQ07021 282 aaKnown RBP5.11□□□□□ -1.59
HMGN2P39-201ENST00000398005 DNAJC5BQ9UF47 199 aa5.09□□□□□ -1.59
HMGN2P39-201ENST00000398005 NCBP3Q53F19 620 aaKnown RBP5.02□□□□□ -1.61
HMGN2P39-201ENST00000398005 NPM3O75607 178 aaKnown RBP5.01□□□□□ -1.61
HMGN2P39-201ENST00000398005 GRWD1Q9BQ67 446 aaKnown RBP eCLIP4.99□□□□□ -1.61
HMGN2P39-201ENST00000398005 KCNA4P22459 653 aa4.96□□□□□ -1.62
HMGN2P39-201ENST00000398005 U3KPZ7 1027 aaPredicted RBP4.91□□□□□ -1.62
HMGN2P39-201ENST00000398005 SPINK5Q9NQ38 1064 aaPredicted RBP4.88□□□□□ -1.63
HMGN2P39-201ENST00000398005 POTEHQ6S545 545 aa4.87□□□□□ -1.63
HMGN2P39-201ENST00000398005 SLC24A1O60721 1099 aa4.86□□□□□ -1.63
HMGN2P39-201ENST00000398005 DSG3P32926 999 aa4.86□□□□□ -1.63
HMGN2P39-201ENST00000398005 CSRNP3Q8WYN3 585 aa4.85□□□□□ -1.63
HMGN2P39-201ENST00000398005 CAPN15O75808 1086 aa4.84□□□□□ -1.63
HMGN2P39-201ENST00000398005 SLC4A2P04920 1241 aa4.82□□□□□ -1.64
HMGN2P39-201ENST00000398005 SLC4A1APQ9BWU0 796 aaKnown RBP4.81□□□□□ -1.64
HMGN2P39-201ENST00000398005 ABCB7O75027 752 aa4.74□□□□□ -1.65
HMGN2P39-201ENST00000398005 TRHP20396 242 aaPredicted RBP4.74□□□□□ -1.65
HMGN2P39-201ENST00000398005 ZNF219Q9P2Y4 722 aaPredicted RBP4.71□□□□□ -1.66
HMGN2P39-201ENST00000398005 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP4.68□□□□□ -1.66
HMGN2P39-201ENST00000398005 APLP2Q06481 763 aa4.68□□□□□ -1.66
HMGN2P39-201ENST00000398005 HNRNPUL2Q1KMD3 747 aaKnown RBP4.68□□□□□ -1.66
HMGN2P39-201ENST00000398005 AMER1Q5JTC6 1135 aaPredicted RBP4.67□□□□□ -1.66
HMGN2P39-201ENST00000398005 RTN4Q9NQC3 1192 aaKnown RBP4.67□□□□□ -1.66
HMGN2P39-201ENST00000398005 SAMD1Q6SPF0 538 aaPredicted RBP4.65□□□□□ -1.67
HMGN2P39-201ENST00000398005 POLA2Q14181 598 aa4.61□□□□□ -1.67
HMGN2P39-201ENST00000398005 MYCNP04198 464 aaPredicted RBP4.6□□□□□ -1.67
HMGN2P39-201ENST00000398005 RBM42Q9BTD8 480 aaKnown RBP4.59□□□□□ -1.67
HMGN2P39-201ENST00000398005 CHRDL2Q6WN34 429 aa4.56□□□□□ -1.68
HMGN2P39-201ENST00000398005 ATF5Q9Y2D1 282 aaPredicted RBP4.56□□□□□ -1.68
HMGN2P39-201ENST00000398005 ZBTB22O15209 634 aa4.55□□□□□ -1.68
HMGN2P39-201ENST00000398005 FOXD4L1Q9NU39 408 aa4.5□□□□□ -1.69
HMGN2P39-201ENST00000398005 AKT1S1Q96B36 256 aa4.49□□□□□ -1.69
HMGN2P39-201ENST00000398005 REM2Q8IYK8 340 aaPredicted RBP4.46□□□□□ -1.7
HMGN2P39-201ENST00000398005 OSCARQ8IYS5 282 aa4.46□□□□□ -1.7
HMGN2P39-201ENST00000398005 ZBTB12Q9Y330 459 aaPredicted RBP4.45□□□□□ -1.7
HMGN2P39-201ENST00000398005 PIP4P2Q8N4L2 257 aa4.44□□□□□ -1.7
HMGN2P39-201ENST00000398005 SP7Q8TDD2 431 aaPredicted RBP4.44□□□□□ -1.7
HMGN2P39-201ENST00000398005 PITPNM1O00562 1244 aa4.42□□□□□ -1.7
HMGN2P39-201ENST00000398005 FXR2P51116 673 aaKnown RBP eCLIP4.41□□□□□ -1.7
HMGN2P39-201ENST00000398005 FKBP8Q14318 412 aa4.4□□□□□ -1.71
HMGN2P39-201ENST00000398005 HAX1O00165 279 aa4.37□□□□□ -1.71
HMGN2P39-201ENST00000398005 ATXN8OSP0DMR3 200 aa4.37□□□□□ -1.71
HMGN2P39-201ENST00000398005 EVX2Q03828 476 aa4.37□□□□□ -1.71
HMGN2P39-201ENST00000398005 SPDYE2BA6NHP3 402 aa4.33□□□□□ -1.72
HMGN2P39-201ENST00000398005 SPDYE6P0CI01 402 aa4.33□□□□□ -1.72
HMGN2P39-201ENST00000398005 MKRN4PQ13434 485 aaPredicted RBP4.33□□□□□ -1.72
HMGN2P39-201ENST00000398005 SPDYE2Q495Y8 402 aa4.33□□□□□ -1.72
HMGN2P39-201ENST00000398005 FBLN2P98095 1184 aa4.31□□□□□ -1.72
HMGN2P39-201ENST00000398005 PRKAR2AP13861 404 aaKnown RBP4.29□□□□□ -1.72
HMGN2P39-201ENST00000398005 CLEC11AQ9Y240 323 aa4.29□□□□□ -1.72
HMGN2P39-201ENST00000398005 SSUH2Q9Y2M2 353 aa4.29□□□□□ -1.72
HMGN2P39-201ENST00000398005 PRKCSHP14314 528 aaPredicted RBP4.28□□□□□ -1.72
HMGN2P39-201ENST00000398005 PLCB2Q00722 1185 aa4.28□□□□□ -1.72
HMGN2P39-201ENST00000398005 ZNF692Q9BU19 519 aaPredicted RBP4.28□□□□□ -1.72
HMGN2P39-201ENST00000398005 C19orf67A6NJJ6 358 aa4.27□□□□□ -1.73
HMGN2P39-201ENST00000398005 HAP1P54257 671 aaPredicted RBP4.27□□□□□ -1.73
HMGN2P39-201ENST00000398005 SPDYE1Q8NFV5 336 aaPredicted RBP4.27□□□□□ -1.73
HMGN2P39-201ENST00000398005 BCANQ96GW7 911 aa4.27□□□□□ -1.73
HMGN2P39-201ENST00000398005 CHADLQ6NUI6 762 aa4.25□□□□□ -1.73
HMGN2P39-201ENST00000398005 TAOK2Q9UL54 1235 aa4.24□□□□□ -1.73
HMGN2P39-201ENST00000398005 GABBR2O75899 941 aa4.23□□□□□ -1.73
HMGN2P39-201ENST00000398005 PABPN1Q86U42 306 aaKnown RBP eCLIP4.22□□□□□ -1.73
HMGN2P39-201ENST00000398005 DCAF8L2P0C7V8 631 aa4.21□□□□□ -1.74
HMGN2P39-201ENST00000398005 PRR29P0C7W0 189 aa4.2□□□□□ -1.74
HMGN2P39-201ENST00000398005 TPRNQ4KMQ1 711 aa4.19□□□□□ -1.74
HMGN2P39-201ENST00000398005 POTEIP0CG38 1075 aa4.17□□□□□ -1.74
HMGN2P39-201ENST00000398005 LHX8Q68G74 356 aa4.17□□□□□ -1.74
HMGN2P39-201ENST00000398005 VSIG10Q8N0Z9 540 aa4.16□□□□□ -1.74
HMGN2P39-201ENST00000398005 FARP1Q9Y4F1 1045 aaPredicted RBP4.15□□□□□ -1.75
HMGN2P39-201ENST00000398005 CD44P16070 742 aaKnown RBP4.14□□□□□ -1.75
HMGN2P39-201ENST00000398005 FBXO3Q9UK99 471 aa4.13□□□□□ -1.75
HMGN2P39-201ENST00000398005 DAXXQ9UER7 740 aaPredicted RBP4.11□□□□□ -1.75
HMGN2P39-201ENST00000398005 CREBZFQ9NS37 354 aa4.1□□□□□ -1.75
HMGN2P39-201ENST00000398005 PLSCR2Q9NRY7 297 aa4.09□□□□□ -1.75
HMGN2P39-201ENST00000398005 CLCN6P51797 869 aa4.08□□□□□ -1.76
HMGN2P39-201ENST00000398005 ZNF579Q8NAF0 562 aaKnown RBP4.08□□□□□ -1.76
HMGN2P39-201ENST00000398005 ZBTB4Q9P1Z0 1013 aaPredicted RBP4.08□□□□□ -1.76
HMGN2P39-201ENST00000398005 TIMELESSQ9UNS1 1208 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 189.1 ms