Protein–RNA interactions for Protein: Q9Y6Q1

CAPN6, Calpain-6, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN6Q9Y6Q1 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
CAPN6Q9Y6Q1 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CAPN6Q9Y6Q1 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CAPN6Q9Y6Q1 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.25■□□□□ 0.83
CAPN6Q9Y6Q1 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.25■□□□□ 0.83
CAPN6Q9Y6Q1 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.25■□□□□ 0.83
CAPN6Q9Y6Q1 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.25■□□□□ 0.83
CAPN6Q9Y6Q1 RAP2CP1-201ENST00000605103 478 ntBASIC20.25■□□□□ 0.83
CAPN6Q9Y6Q1 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC20.25■□□□□ 0.83
CAPN6Q9Y6Q1 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
CAPN6Q9Y6Q1 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CAPN6Q9Y6Q1 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CAPN6Q9Y6Q1 AC068880.1-201ENST00000507289 2297 ntBASIC20.25■□□□□ 0.83
CAPN6Q9Y6Q1 NOC2LP2-201ENST00000407594 1944 ntBASIC20.25■□□□□ 0.83
CAPN6Q9Y6Q1 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CAPN6Q9Y6Q1 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CAPN6Q9Y6Q1 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC20.24■□□□□ 0.83
CAPN6Q9Y6Q1 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CAPN6Q9Y6Q1 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CAPN6Q9Y6Q1 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC20.24■□□□□ 0.83
CAPN6Q9Y6Q1 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CAPN6Q9Y6Q1 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CAPN6Q9Y6Q1 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC20.24■□□□□ 0.83
CAPN6Q9Y6Q1 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CAPN6Q9Y6Q1 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CAPN6Q9Y6Q1 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.24■□□□□ 0.83
CAPN6Q9Y6Q1 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
CAPN6Q9Y6Q1 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CAPN6Q9Y6Q1 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.24■□□□□ 0.83
CAPN6Q9Y6Q1 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.24■□□□□ 0.83
CAPN6Q9Y6Q1 CROCCP5-201ENST00000436658 830 ntBASIC20.24■□□□□ 0.83
CAPN6Q9Y6Q1 AC091874.3-201ENST00000512672 1195 ntBASIC20.24■□□□□ 0.83
CAPN6Q9Y6Q1 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.24■□□□□ 0.83
CAPN6Q9Y6Q1 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.24■□□□□ 0.83
CAPN6Q9Y6Q1 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CAPN6Q9Y6Q1 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
CAPN6Q9Y6Q1 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CAPN6Q9Y6Q1 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CAPN6Q9Y6Q1 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
CAPN6Q9Y6Q1 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CAPN6Q9Y6Q1 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CAPN6Q9Y6Q1 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CAPN6Q9Y6Q1 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CAPN6Q9Y6Q1 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CAPN6Q9Y6Q1 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CAPN6Q9Y6Q1 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CAPN6Q9Y6Q1 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC20.23■□□□□ 0.83
CAPN6Q9Y6Q1 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC20.23■□□□□ 0.83
CAPN6Q9Y6Q1 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
CAPN6Q9Y6Q1 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CAPN6Q9Y6Q1 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CAPN6Q9Y6Q1 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CAPN6Q9Y6Q1 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.23■□□□□ 0.83
CAPN6Q9Y6Q1 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CAPN6Q9Y6Q1 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CAPN6Q9Y6Q1 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.23■□□□□ 0.83
CAPN6Q9Y6Q1 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.23■□□□□ 0.83
CAPN6Q9Y6Q1 PNN-205ENST00000556530 601 ntTSL 2 BASIC20.23■□□□□ 0.83
CAPN6Q9Y6Q1 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.23■□□□□ 0.83
CAPN6Q9Y6Q1 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CAPN6Q9Y6Q1 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CAPN6Q9Y6Q1 IKBKGP1-201ENST00000612193 1073 ntBASIC20.23■□□□□ 0.83
CAPN6Q9Y6Q1 AC092118.2-201ENST00000613495 667 ntBASIC20.23■□□□□ 0.83
CAPN6Q9Y6Q1 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CAPN6Q9Y6Q1 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CAPN6Q9Y6Q1 CD276-201ENST00000318424 2738 ntTSL 5 BASIC20.23■□□□□ 0.83
CAPN6Q9Y6Q1 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CAPN6Q9Y6Q1 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CAPN6Q9Y6Q1 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC20.23■□□□□ 0.83
CAPN6Q9Y6Q1 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CAPN6Q9Y6Q1 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC20.22■□□□□ 0.83
CAPN6Q9Y6Q1 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CAPN6Q9Y6Q1 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
CAPN6Q9Y6Q1 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC20.22■□□□□ 0.83
CAPN6Q9Y6Q1 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CAPN6Q9Y6Q1 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CAPN6Q9Y6Q1 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CAPN6Q9Y6Q1 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC20.22■□□□□ 0.83
CAPN6Q9Y6Q1 COBL-210ENST00000632460 1941 ntTSL 5 BASIC20.22■□□□□ 0.83
CAPN6Q9Y6Q1 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CAPN6Q9Y6Q1 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CAPN6Q9Y6Q1 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.22■□□□□ 0.83
CAPN6Q9Y6Q1 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.22■□□□□ 0.83
CAPN6Q9Y6Q1 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.22■□□□□ 0.83
CAPN6Q9Y6Q1 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC20.22■□□□□ 0.83
CAPN6Q9Y6Q1 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.22■□□□□ 0.83
CAPN6Q9Y6Q1 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CAPN6Q9Y6Q1 MIR5787-201ENST00000611784 55 ntBASIC20.22■□□□□ 0.83
CAPN6Q9Y6Q1 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CAPN6Q9Y6Q1 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CAPN6Q9Y6Q1 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CAPN6Q9Y6Q1 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.22■□□□□ 0.83
CAPN6Q9Y6Q1 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.22■□□□□ 0.83
CAPN6Q9Y6Q1 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC20.22■□□□□ 0.83
CAPN6Q9Y6Q1 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC20.22■□□□□ 0.83
CAPN6Q9Y6Q1 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CAPN6Q9Y6Q1 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CAPN6Q9Y6Q1 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CAPN6Q9Y6Q1 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CAPN6Q9Y6Q1 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms