Protein–RNA interactions for Protein: Q9Y6A2

CYP46A1, Cholesterol 24-hydroxylase, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP46A1Q9Y6A2 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC22.67■■□□□ 1.22
CYP46A1Q9Y6A2 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CYP46A1Q9Y6A2 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC22.67■■□□□ 1.22
CYP46A1Q9Y6A2 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC22.67■■□□□ 1.22
CYP46A1Q9Y6A2 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CYP46A1Q9Y6A2 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC22.67■■□□□ 1.22
CYP46A1Q9Y6A2 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
CYP46A1Q9Y6A2 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC22.67■■□□□ 1.22
CYP46A1Q9Y6A2 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CYP46A1Q9Y6A2 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CYP46A1Q9Y6A2 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CYP46A1Q9Y6A2 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CYP46A1Q9Y6A2 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CYP46A1Q9Y6A2 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
CYP46A1Q9Y6A2 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CYP46A1Q9Y6A2 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CYP46A1Q9Y6A2 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CYP46A1Q9Y6A2 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
CYP46A1Q9Y6A2 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC22.66■■□□□ 1.22
CYP46A1Q9Y6A2 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CYP46A1Q9Y6A2 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC22.66■■□□□ 1.22
CYP46A1Q9Y6A2 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC22.66■■□□□ 1.22
CYP46A1Q9Y6A2 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
CYP46A1Q9Y6A2 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CYP46A1Q9Y6A2 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC22.66■■□□□ 1.22
CYP46A1Q9Y6A2 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC22.66■■□□□ 1.22
CYP46A1Q9Y6A2 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC22.66■■□□□ 1.22
CYP46A1Q9Y6A2 MIR4651-201ENST00000582622 73 ntBASIC22.66■■□□□ 1.22
CYP46A1Q9Y6A2 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CYP46A1Q9Y6A2 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC22.66■■□□□ 1.22
CYP46A1Q9Y6A2 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
CYP46A1Q9Y6A2 GOLGA6L5P-202ENST00000515341 1828 ntBASIC22.66■■□□□ 1.22
CYP46A1Q9Y6A2 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC22.66■■□□□ 1.22
CYP46A1Q9Y6A2 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CYP46A1Q9Y6A2 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC22.65■■□□□ 1.22
CYP46A1Q9Y6A2 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CYP46A1Q9Y6A2 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC22.65■■□□□ 1.22
CYP46A1Q9Y6A2 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC22.65■■□□□ 1.22
CYP46A1Q9Y6A2 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
CYP46A1Q9Y6A2 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CYP46A1Q9Y6A2 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
CYP46A1Q9Y6A2 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC22.65■■□□□ 1.22
CYP46A1Q9Y6A2 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CYP46A1Q9Y6A2 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC22.65■■□□□ 1.22
CYP46A1Q9Y6A2 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
CYP46A1Q9Y6A2 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC22.65■■□□□ 1.22
CYP46A1Q9Y6A2 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CYP46A1Q9Y6A2 TSPY23P-201ENST00000440136 739 ntBASIC22.65■■□□□ 1.22
CYP46A1Q9Y6A2 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
CYP46A1Q9Y6A2 AC128676.1-201ENST00000454392 318 ntBASIC22.65■■□□□ 1.22
CYP46A1Q9Y6A2 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC22.65■■□□□ 1.22
CYP46A1Q9Y6A2 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC22.65■■□□□ 1.22
CYP46A1Q9Y6A2 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC22.65■■□□□ 1.22
CYP46A1Q9Y6A2 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC22.65■■□□□ 1.22
CYP46A1Q9Y6A2 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CYP46A1Q9Y6A2 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC22.65■■□□□ 1.22
CYP46A1Q9Y6A2 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CYP46A1Q9Y6A2 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC22.65■■□□□ 1.22
CYP46A1Q9Y6A2 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC22.65■■□□□ 1.22
CYP46A1Q9Y6A2 KRT8P41-201ENST00000533985 1514 ntBASIC22.65■■□□□ 1.22
CYP46A1Q9Y6A2 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CYP46A1Q9Y6A2 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CYP46A1Q9Y6A2 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
CYP46A1Q9Y6A2 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CYP46A1Q9Y6A2 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CYP46A1Q9Y6A2 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CYP46A1Q9Y6A2 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
CYP46A1Q9Y6A2 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
CYP46A1Q9Y6A2 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
CYP46A1Q9Y6A2 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
CYP46A1Q9Y6A2 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
CYP46A1Q9Y6A2 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC22.64■■□□□ 1.22
CYP46A1Q9Y6A2 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CYP46A1Q9Y6A2 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CYP46A1Q9Y6A2 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CYP46A1Q9Y6A2 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC22.64■■□□□ 1.21
CYP46A1Q9Y6A2 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC22.64■■□□□ 1.21
CYP46A1Q9Y6A2 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC22.64■■□□□ 1.21
CYP46A1Q9Y6A2 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC22.64■■□□□ 1.21
CYP46A1Q9Y6A2 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CYP46A1Q9Y6A2 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CYP46A1Q9Y6A2 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
CYP46A1Q9Y6A2 GAS2L1P1-201ENST00000420145 1480 ntBASIC22.64■■□□□ 1.21
CYP46A1Q9Y6A2 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC22.64■■□□□ 1.21
CYP46A1Q9Y6A2 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CYP46A1Q9Y6A2 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CYP46A1Q9Y6A2 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC22.64■■□□□ 1.21
CYP46A1Q9Y6A2 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
CYP46A1Q9Y6A2 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CYP46A1Q9Y6A2 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
CYP46A1Q9Y6A2 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CYP46A1Q9Y6A2 POU5F1P3-201ENST00000428824 1078 ntBASIC22.63■■□□□ 1.21
CYP46A1Q9Y6A2 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC22.63■■□□□ 1.21
CYP46A1Q9Y6A2 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC22.63■■□□□ 1.21
CYP46A1Q9Y6A2 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CYP46A1Q9Y6A2 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC22.63■■□□□ 1.21
CYP46A1Q9Y6A2 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CYP46A1Q9Y6A2 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CYP46A1Q9Y6A2 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC22.63■■□□□ 1.21
CYP46A1Q9Y6A2 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms