Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC17.8■□□□□ 0.44
CLDN16Q9Y5I7 EGLN1P1-201ENST00000531623 762 ntBASIC17.8■□□□□ 0.44
CLDN16Q9Y5I7 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC17.8■□□□□ 0.44
CLDN16Q9Y5I7 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
CLDN16Q9Y5I7 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17.8■□□□□ 0.44
CLDN16Q9Y5I7 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.8■□□□□ 0.44
CLDN16Q9Y5I7 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN16Q9Y5I7 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN16Q9Y5I7 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN16Q9Y5I7 AC133561.5-201ENST00000635547 218 ntBASIC17.8■□□□□ 0.44
CLDN16Q9Y5I7 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN16Q9Y5I7 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
CLDN16Q9Y5I7 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC17.8■□□□□ 0.44
CLDN16Q9Y5I7 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN16Q9Y5I7 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN16Q9Y5I7 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
CLDN16Q9Y5I7 AL049812.1-201ENST00000432563 2267 ntBASIC17.79■□□□□ 0.44
CLDN16Q9Y5I7 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.79■□□□□ 0.44
CLDN16Q9Y5I7 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC17.79■□□□□ 0.44
CLDN16Q9Y5I7 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN16Q9Y5I7 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN16Q9Y5I7 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
CLDN16Q9Y5I7 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.79■□□□□ 0.44
CLDN16Q9Y5I7 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN16Q9Y5I7 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN16Q9Y5I7 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN16Q9Y5I7 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CLDN16Q9Y5I7 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.79■□□□□ 0.44
CLDN16Q9Y5I7 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN16Q9Y5I7 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.79■□□□□ 0.44
CLDN16Q9Y5I7 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.79■□□□□ 0.44
CLDN16Q9Y5I7 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC17.79■□□□□ 0.44
CLDN16Q9Y5I7 AC008622.2-201ENST00000617006 1229 ntBASIC17.79■□□□□ 0.44
CLDN16Q9Y5I7 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.79■□□□□ 0.44
CLDN16Q9Y5I7 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.79■□□□□ 0.44
CLDN16Q9Y5I7 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.79■□□□□ 0.44
CLDN16Q9Y5I7 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN16Q9Y5I7 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN16Q9Y5I7 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
CLDN16Q9Y5I7 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.79■□□□□ 0.44
CLDN16Q9Y5I7 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN16Q9Y5I7 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN16Q9Y5I7 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.78■□□□□ 0.44
CLDN16Q9Y5I7 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CLDN16Q9Y5I7 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN16Q9Y5I7 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN16Q9Y5I7 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.78■□□□□ 0.44
CLDN16Q9Y5I7 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN16Q9Y5I7 SLC25A1P2-201ENST00000430693 912 ntBASIC17.78■□□□□ 0.44
CLDN16Q9Y5I7 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.78■□□□□ 0.44
CLDN16Q9Y5I7 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.78■□□□□ 0.44
CLDN16Q9Y5I7 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
CLDN16Q9Y5I7 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.78■□□□□ 0.44
CLDN16Q9Y5I7 C2orf69P3-201ENST00000565542 1120 ntBASIC17.78■□□□□ 0.44
CLDN16Q9Y5I7 FAM87A-204ENST00000613235 858 ntBASIC17.78■□□□□ 0.44
CLDN16Q9Y5I7 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN16Q9Y5I7 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN16Q9Y5I7 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN16Q9Y5I7 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN16Q9Y5I7 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CLDN16Q9Y5I7 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.78■□□□□ 0.44
CLDN16Q9Y5I7 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.78■□□□□ 0.44
CLDN16Q9Y5I7 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
CLDN16Q9Y5I7 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CLDN16Q9Y5I7 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLDN16Q9Y5I7 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLDN16Q9Y5I7 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CLDN16Q9Y5I7 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLDN16Q9Y5I7 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLDN16Q9Y5I7 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.77■□□□□ 0.44
CLDN16Q9Y5I7 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLDN16Q9Y5I7 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.77■□□□□ 0.44
CLDN16Q9Y5I7 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CLDN16Q9Y5I7 ECEL1P3-201ENST00000427961 737 ntBASIC17.77■□□□□ 0.44
CLDN16Q9Y5I7 AC007663.1-201ENST00000438948 1240 ntBASIC17.77■□□□□ 0.44
CLDN16Q9Y5I7 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.77■□□□□ 0.44
CLDN16Q9Y5I7 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.77■□□□□ 0.44
CLDN16Q9Y5I7 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
CLDN16Q9Y5I7 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
CLDN16Q9Y5I7 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.77■□□□□ 0.43
CLDN16Q9Y5I7 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CLDN16Q9Y5I7 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CLDN16Q9Y5I7 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC17.77■□□□□ 0.43
CLDN16Q9Y5I7 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.77■□□□□ 0.43
CLDN16Q9Y5I7 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.77■□□□□ 0.43
CLDN16Q9Y5I7 LINC01568-207ENST00000641790 1380 ntBASIC17.77■□□□□ 0.43
CLDN16Q9Y5I7 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CLDN16Q9Y5I7 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN16Q9Y5I7 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN16Q9Y5I7 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN16Q9Y5I7 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN16Q9Y5I7 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CLDN16Q9Y5I7 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CLDN16Q9Y5I7 KRT8P3-201ENST00000519669 1449 ntBASIC17.76■□□□□ 0.43
CLDN16Q9Y5I7 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN16Q9Y5I7 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN16Q9Y5I7 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN16Q9Y5I7 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.76■□□□□ 0.43
CLDN16Q9Y5I7 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CLDN16Q9Y5I7 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms