Protein–RNA interactions for Protein: Q9Y5F9

PCDHGB6, Protocadherin gamma-B6, humanhuman

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6Q9Y5F9 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGB6Q9Y5F9 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGB6Q9Y5F9 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGB6Q9Y5F9 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC18.05■□□□□ 0.48
PCDHGB6Q9Y5F9 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGB6Q9Y5F9 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC18.05■□□□□ 0.48
PCDHGB6Q9Y5F9 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGB6Q9Y5F9 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.05■□□□□ 0.48
PCDHGB6Q9Y5F9 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGB6Q9Y5F9 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC18.05■□□□□ 0.48
PCDHGB6Q9Y5F9 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC18.05■□□□□ 0.48
PCDHGB6Q9Y5F9 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGB6Q9Y5F9 AC010331.1-201ENST00000611423 582 ntBASIC18.05■□□□□ 0.48
PCDHGB6Q9Y5F9 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
PCDHGB6Q9Y5F9 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
PCDHGB6Q9Y5F9 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.05■□□□□ 0.48
PCDHGB6Q9Y5F9 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
PCDHGB6Q9Y5F9 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGB6Q9Y5F9 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGB6Q9Y5F9 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.05■□□□□ 0.48
PCDHGB6Q9Y5F9 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGB6Q9Y5F9 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGB6Q9Y5F9 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGB6Q9Y5F9 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.04■□□□□ 0.48
PCDHGB6Q9Y5F9 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.04■□□□□ 0.48
PCDHGB6Q9Y5F9 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGB6Q9Y5F9 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGB6Q9Y5F9 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.04■□□□□ 0.48
PCDHGB6Q9Y5F9 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
PCDHGB6Q9Y5F9 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGB6Q9Y5F9 UNC93B2-201ENST00000285383 730 ntBASIC18.04■□□□□ 0.48
PCDHGB6Q9Y5F9 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC18.04■□□□□ 0.48
PCDHGB6Q9Y5F9 AC116562.2-201ENST00000507042 360 ntBASIC18.04■□□□□ 0.48
PCDHGB6Q9Y5F9 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC18.04■□□□□ 0.48
PCDHGB6Q9Y5F9 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGB6Q9Y5F9 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.04■□□□□ 0.48
PCDHGB6Q9Y5F9 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC18.04■□□□□ 0.48
PCDHGB6Q9Y5F9 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGB6Q9Y5F9 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGB6Q9Y5F9 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGB6Q9Y5F9 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.04■□□□□ 0.48
PCDHGB6Q9Y5F9 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGB6Q9Y5F9 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGB6Q9Y5F9 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGB6Q9Y5F9 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGB6Q9Y5F9 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGB6Q9Y5F9 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.03■□□□□ 0.48
PCDHGB6Q9Y5F9 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGB6Q9Y5F9 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.03■□□□□ 0.48
PCDHGB6Q9Y5F9 AL691432.2-201ENST00000607222 2038 ntBASIC18.03■□□□□ 0.48
PCDHGB6Q9Y5F9 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
PCDHGB6Q9Y5F9 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
PCDHGB6Q9Y5F9 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.03■□□□□ 0.48
PCDHGB6Q9Y5F9 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGB6Q9Y5F9 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGB6Q9Y5F9 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGB6Q9Y5F9 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18.03■□□□□ 0.48
PCDHGB6Q9Y5F9 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.03■□□□□ 0.48
PCDHGB6Q9Y5F9 YBX1P10-201ENST00000444752 975 ntBASIC18.03■□□□□ 0.48
PCDHGB6Q9Y5F9 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC18.03■□□□□ 0.48
PCDHGB6Q9Y5F9 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
PCDHGB6Q9Y5F9 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.03■□□□□ 0.48
PCDHGB6Q9Y5F9 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.03■□□□□ 0.48
PCDHGB6Q9Y5F9 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18.03■□□□□ 0.48
PCDHGB6Q9Y5F9 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGB6Q9Y5F9 KRT16P1-201ENST00000399124 1418 ntBASIC18.03■□□□□ 0.48
PCDHGB6Q9Y5F9 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGB6Q9Y5F9 TFP1-202ENST00000475455 1573 ntBASIC18.03■□□□□ 0.48
PCDHGB6Q9Y5F9 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGB6Q9Y5F9 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGB6Q9Y5F9 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.03■□□□□ 0.48
PCDHGB6Q9Y5F9 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGB6Q9Y5F9 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.03■□□□□ 0.48
PCDHGB6Q9Y5F9 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGB6Q9Y5F9 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.02■□□□□ 0.48
PCDHGB6Q9Y5F9 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.02■□□□□ 0.48
PCDHGB6Q9Y5F9 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHGB6Q9Y5F9 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHGB6Q9Y5F9 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHGB6Q9Y5F9 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHGB6Q9Y5F9 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHGB6Q9Y5F9 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
PCDHGB6Q9Y5F9 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHGB6Q9Y5F9 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHGB6Q9Y5F9 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
PCDHGB6Q9Y5F9 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHGB6Q9Y5F9 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
PCDHGB6Q9Y5F9 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.02■□□□□ 0.48
PCDHGB6Q9Y5F9 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC18.02■□□□□ 0.48
PCDHGB6Q9Y5F9 C1QL1P1-201ENST00000568105 661 ntBASIC18.02■□□□□ 0.48
PCDHGB6Q9Y5F9 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC18.02■□□□□ 0.48
PCDHGB6Q9Y5F9 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC18.02■□□□□ 0.48
PCDHGB6Q9Y5F9 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.02■□□□□ 0.48
PCDHGB6Q9Y5F9 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.02■□□□□ 0.48
PCDHGB6Q9Y5F9 GLDC-219ENST00000640208 420 ntTSL 2 BASIC18.02■□□□□ 0.48
PCDHGB6Q9Y5F9 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHGB6Q9Y5F9 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.02■□□□□ 0.47
PCDHGB6Q9Y5F9 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.47
PCDHGB6Q9Y5F9 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.02■□□□□ 0.47
PCDHGB6Q9Y5F9 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms