Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
UBE2D4Q9Y2X8 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC13.31□□□□□ -0.28
UBE2D4Q9Y2X8 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC13.31□□□□□ -0.28
UBE2D4Q9Y2X8 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
UBE2D4Q9Y2X8 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
UBE2D4Q9Y2X8 KRT18P5-201ENST00000436075 1291 ntBASIC13.31□□□□□ -0.28
UBE2D4Q9Y2X8 HES2-206ENST00000489730 730 ntTSL 2 BASIC13.31□□□□□ -0.28
UBE2D4Q9Y2X8 PLD4-205ENST00000553861 667 ntTSL 2 BASIC13.31□□□□□ -0.28
UBE2D4Q9Y2X8 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
UBE2D4Q9Y2X8 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
UBE2D4Q9Y2X8 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
UBE2D4Q9Y2X8 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
UBE2D4Q9Y2X8 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC13.31□□□□□ -0.28
UBE2D4Q9Y2X8 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
UBE2D4Q9Y2X8 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
UBE2D4Q9Y2X8 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
UBE2D4Q9Y2X8 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
UBE2D4Q9Y2X8 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
UBE2D4Q9Y2X8 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC13.31□□□□□ -0.28
UBE2D4Q9Y2X8 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
UBE2D4Q9Y2X8 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
UBE2D4Q9Y2X8 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
UBE2D4Q9Y2X8 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC13.31□□□□□ -0.28
UBE2D4Q9Y2X8 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
UBE2D4Q9Y2X8 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
UBE2D4Q9Y2X8 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
UBE2D4Q9Y2X8 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
UBE2D4Q9Y2X8 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
UBE2D4Q9Y2X8 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
UBE2D4Q9Y2X8 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
UBE2D4Q9Y2X8 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
UBE2D4Q9Y2X8 KRT8P8-201ENST00000434750 1448 ntBASIC13.3□□□□□ -0.28
UBE2D4Q9Y2X8 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC13.3□□□□□ -0.28
UBE2D4Q9Y2X8 ANO7L1-203ENST00000602586 1720 ntBASIC13.3□□□□□ -0.28
UBE2D4Q9Y2X8 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC13.3□□□□□ -0.28
UBE2D4Q9Y2X8 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
UBE2D4Q9Y2X8 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC13.3□□□□□ -0.28
UBE2D4Q9Y2X8 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
UBE2D4Q9Y2X8 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
UBE2D4Q9Y2X8 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
UBE2D4Q9Y2X8 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
UBE2D4Q9Y2X8 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC13.3□□□□□ -0.28
UBE2D4Q9Y2X8 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
UBE2D4Q9Y2X8 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC13.3□□□□□ -0.28
UBE2D4Q9Y2X8 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
UBE2D4Q9Y2X8 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC13.3□□□□□ -0.28
UBE2D4Q9Y2X8 AL133373.2-201ENST00000623187 2828 ntBASIC13.3□□□□□ -0.28
UBE2D4Q9Y2X8 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
UBE2D4Q9Y2X8 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
UBE2D4Q9Y2X8 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
UBE2D4Q9Y2X8 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC13.3□□□□□ -0.28
UBE2D4Q9Y2X8 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
UBE2D4Q9Y2X8 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
UBE2D4Q9Y2X8 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC13.3□□□□□ -0.28
UBE2D4Q9Y2X8 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
UBE2D4Q9Y2X8 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC13.3□□□□□ -0.28
UBE2D4Q9Y2X8 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC13.3□□□□□ -0.28
UBE2D4Q9Y2X8 AC005829.2-201ENST00000571422 1056 ntBASIC13.3□□□□□ -0.28
UBE2D4Q9Y2X8 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
UBE2D4Q9Y2X8 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
UBE2D4Q9Y2X8 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
UBE2D4Q9Y2X8 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC13.3□□□□□ -0.28
UBE2D4Q9Y2X8 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
UBE2D4Q9Y2X8 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC13.3□□□□□ -0.28
UBE2D4Q9Y2X8 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC13.3□□□□□ -0.28
UBE2D4Q9Y2X8 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
UBE2D4Q9Y2X8 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
UBE2D4Q9Y2X8 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
UBE2D4Q9Y2X8 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
UBE2D4Q9Y2X8 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
UBE2D4Q9Y2X8 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
UBE2D4Q9Y2X8 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
UBE2D4Q9Y2X8 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
UBE2D4Q9Y2X8 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
UBE2D4Q9Y2X8 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
UBE2D4Q9Y2X8 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
UBE2D4Q9Y2X8 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC13.29□□□□□ -0.28
UBE2D4Q9Y2X8 NOC2LP2-201ENST00000407594 1944 ntBASIC13.29□□□□□ -0.28
UBE2D4Q9Y2X8 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
UBE2D4Q9Y2X8 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
UBE2D4Q9Y2X8 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
UBE2D4Q9Y2X8 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
UBE2D4Q9Y2X8 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
UBE2D4Q9Y2X8 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
UBE2D4Q9Y2X8 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC13.29□□□□□ -0.28
UBE2D4Q9Y2X8 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
UBE2D4Q9Y2X8 RER1-204ENST00000378518 522 ntTSL 3 BASIC13.29□□□□□ -0.28
UBE2D4Q9Y2X8 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC13.29□□□□□ -0.28
UBE2D4Q9Y2X8 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
UBE2D4Q9Y2X8 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
UBE2D4Q9Y2X8 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
UBE2D4Q9Y2X8 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
UBE2D4Q9Y2X8 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
UBE2D4Q9Y2X8 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
UBE2D4Q9Y2X8 MDK-213ENST00000617138 635 ntTSL 2 BASIC13.29□□□□□ -0.28
UBE2D4Q9Y2X8 MIR6821-201ENST00000617625 74 ntBASIC13.29□□□□□ -0.28
UBE2D4Q9Y2X8 AC083906.6-201ENST00000641366 219 ntBASIC13.29□□□□□ -0.28
UBE2D4Q9Y2X8 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
UBE2D4Q9Y2X8 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
UBE2D4Q9Y2X8 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms