Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 KRT18P48-201ENST00000434763 852 ntBASIC26.16■■□□□ 1.78
NINLQ9Y2I6 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
NINLQ9Y2I6 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
NINLQ9Y2I6 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC26.16■■□□□ 1.78
NINLQ9Y2I6 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
NINLQ9Y2I6 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC26.16■■□□□ 1.78
NINLQ9Y2I6 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
NINLQ9Y2I6 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
NINLQ9Y2I6 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
NINLQ9Y2I6 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC26.16■■□□□ 1.78
NINLQ9Y2I6 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
NINLQ9Y2I6 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC26.16■■□□□ 1.78
NINLQ9Y2I6 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
NINLQ9Y2I6 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC26.15■■□□□ 1.78
NINLQ9Y2I6 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
NINLQ9Y2I6 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
NINLQ9Y2I6 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
NINLQ9Y2I6 AC009947.2-201ENST00000444014 672 ntBASIC26.15■■□□□ 1.78
NINLQ9Y2I6 AL441883.1-201ENST00000566170 1045 ntBASIC26.15■■□□□ 1.78
NINLQ9Y2I6 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
NINLQ9Y2I6 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
NINLQ9Y2I6 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
NINLQ9Y2I6 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
NINLQ9Y2I6 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
NINLQ9Y2I6 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
NINLQ9Y2I6 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC26.14■■□□□ 1.78
NINLQ9Y2I6 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC26.14■■□□□ 1.78
NINLQ9Y2I6 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC26.14■■□□□ 1.78
NINLQ9Y2I6 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC26.14■■□□□ 1.78
NINLQ9Y2I6 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
NINLQ9Y2I6 CR769767.2-201ENST00000622735 460 ntBASIC26.14■■□□□ 1.78
NINLQ9Y2I6 AC011558.1-201ENST00000623459 338 ntBASIC26.14■■□□□ 1.78
NINLQ9Y2I6 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
NINLQ9Y2I6 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC26.14■■□□□ 1.77
NINLQ9Y2I6 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC26.14■■□□□ 1.77
NINLQ9Y2I6 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
NINLQ9Y2I6 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC26.14■■□□□ 1.77
NINLQ9Y2I6 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC26.13■■□□□ 1.77
NINLQ9Y2I6 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
NINLQ9Y2I6 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC26.13■■□□□ 1.77
NINLQ9Y2I6 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
NINLQ9Y2I6 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC26.13■■□□□ 1.77
NINLQ9Y2I6 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
NINLQ9Y2I6 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
NINLQ9Y2I6 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC26.13■■□□□ 1.77
NINLQ9Y2I6 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC26.13■■□□□ 1.77
NINLQ9Y2I6 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC26.13■■□□□ 1.77
NINLQ9Y2I6 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC26.13■■□□□ 1.77
NINLQ9Y2I6 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC26.13■■□□□ 1.77
NINLQ9Y2I6 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
NINLQ9Y2I6 AL023973.1-201ENST00000624619 620 ntBASIC26.13■■□□□ 1.77
NINLQ9Y2I6 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
NINLQ9Y2I6 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC26.13■■□□□ 1.77
NINLQ9Y2I6 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC26.13■■□□□ 1.77
NINLQ9Y2I6 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
NINLQ9Y2I6 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
NINLQ9Y2I6 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC26.13■■□□□ 1.77
NINLQ9Y2I6 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC26.12■■□□□ 1.77
NINLQ9Y2I6 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC26.12■■□□□ 1.77
NINLQ9Y2I6 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
NINLQ9Y2I6 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
NINLQ9Y2I6 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
NINLQ9Y2I6 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC26.12■■□□□ 1.77
NINLQ9Y2I6 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC26.12■■□□□ 1.77
NINLQ9Y2I6 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
NINLQ9Y2I6 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC26.12■■□□□ 1.77
NINLQ9Y2I6 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC26.12■■□□□ 1.77
NINLQ9Y2I6 COPE-203ENST00000351079 907 ntTSL 2 BASIC26.12■■□□□ 1.77
NINLQ9Y2I6 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
NINLQ9Y2I6 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC26.12■■□□□ 1.77
NINLQ9Y2I6 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC26.12■■□□□ 1.77
NINLQ9Y2I6 AL358472.4-201ENST00000633140 710 ntBASIC26.12■■□□□ 1.77
NINLQ9Y2I6 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC26.12■■□□□ 1.77
NINLQ9Y2I6 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
NINLQ9Y2I6 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
NINLQ9Y2I6 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC26.12■■□□□ 1.77
NINLQ9Y2I6 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC26.12■■□□□ 1.77
NINLQ9Y2I6 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC26.12■■□□□ 1.77
NINLQ9Y2I6 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
NINLQ9Y2I6 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
NINLQ9Y2I6 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC26.12■■□□□ 1.77
NINLQ9Y2I6 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC26.12■■□□□ 1.77
NINLQ9Y2I6 GPAT2P1-201ENST00000444924 1672 ntBASIC26.12■■□□□ 1.77
NINLQ9Y2I6 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC26.12■■□□□ 1.77
NINLQ9Y2I6 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC26.11■■□□□ 1.77
NINLQ9Y2I6 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
NINLQ9Y2I6 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC26.11■■□□□ 1.77
NINLQ9Y2I6 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC26.11■■□□□ 1.77
NINLQ9Y2I6 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
NINLQ9Y2I6 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC26.11■■□□□ 1.77
NINLQ9Y2I6 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC26.11■■□□□ 1.77
NINLQ9Y2I6 VPS72-207ENST00000640458 689 ntTSL 5 BASIC26.11■■□□□ 1.77
NINLQ9Y2I6 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC26.11■■□□□ 1.77
NINLQ9Y2I6 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
NINLQ9Y2I6 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
NINLQ9Y2I6 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC26.11■■□□□ 1.77
NINLQ9Y2I6 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
NINLQ9Y2I6 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
NINLQ9Y2I6 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC26.11■■□□□ 1.77
NINLQ9Y2I6 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms