Protein–RNA interactions for Protein: Q9UNH7

SNX6, Sorting nexin-6, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6Q9UNH7 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SNX6Q9UNH7 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SNX6Q9UNH7 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SNX6Q9UNH7 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SNX6Q9UNH7 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.49■□□□□ 0.55
SNX6Q9UNH7 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
SNX6Q9UNH7 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SNX6Q9UNH7 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SNX6Q9UNH7 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.49■□□□□ 0.55
SNX6Q9UNH7 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
SNX6Q9UNH7 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SNX6Q9UNH7 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.49■□□□□ 0.55
SNX6Q9UNH7 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.49■□□□□ 0.55
SNX6Q9UNH7 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SNX6Q9UNH7 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SNX6Q9UNH7 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
SNX6Q9UNH7 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
SNX6Q9UNH7 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SNX6Q9UNH7 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SNX6Q9UNH7 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SNX6Q9UNH7 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
SNX6Q9UNH7 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SNX6Q9UNH7 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
SNX6Q9UNH7 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
SNX6Q9UNH7 FEM1AP3-201ENST00000403722 1741 ntBASIC18.49■□□□□ 0.55
SNX6Q9UNH7 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
SNX6Q9UNH7 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.48■□□□□ 0.55
SNX6Q9UNH7 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
SNX6Q9UNH7 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SNX6Q9UNH7 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SNX6Q9UNH7 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.48■□□□□ 0.55
SNX6Q9UNH7 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SNX6Q9UNH7 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SNX6Q9UNH7 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.48■□□□□ 0.55
SNX6Q9UNH7 KRT18P6-201ENST00000555540 1265 ntBASIC18.48■□□□□ 0.55
SNX6Q9UNH7 AL160286.2-201ENST00000567150 934 ntBASIC18.48■□□□□ 0.55
SNX6Q9UNH7 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC18.48■□□□□ 0.55
SNX6Q9UNH7 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.48■□□□□ 0.55
SNX6Q9UNH7 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.48■□□□□ 0.55
SNX6Q9UNH7 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SNX6Q9UNH7 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SNX6Q9UNH7 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.48■□□□□ 0.55
SNX6Q9UNH7 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SNX6Q9UNH7 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SNX6Q9UNH7 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
SNX6Q9UNH7 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SNX6Q9UNH7 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.48■□□□□ 0.55
SNX6Q9UNH7 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SNX6Q9UNH7 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SNX6Q9UNH7 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SNX6Q9UNH7 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SNX6Q9UNH7 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SNX6Q9UNH7 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.47■□□□□ 0.55
SNX6Q9UNH7 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SNX6Q9UNH7 CROCCP3-202ENST00000420820 1947 ntBASIC18.47■□□□□ 0.55
SNX6Q9UNH7 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SNX6Q9UNH7 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SNX6Q9UNH7 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.47■□□□□ 0.55
SNX6Q9UNH7 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.47■□□□□ 0.55
SNX6Q9UNH7 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.47■□□□□ 0.55
SNX6Q9UNH7 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.47■□□□□ 0.55
SNX6Q9UNH7 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.47■□□□□ 0.55
SNX6Q9UNH7 HLA-A-209ENST00000638375 975 ntBASIC18.47■□□□□ 0.55
SNX6Q9UNH7 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
SNX6Q9UNH7 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SNX6Q9UNH7 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.47■□□□□ 0.55
SNX6Q9UNH7 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
SNX6Q9UNH7 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
SNX6Q9UNH7 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.47■□□□□ 0.55
SNX6Q9UNH7 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SNX6Q9UNH7 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
SNX6Q9UNH7 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SNX6Q9UNH7 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.47■□□□□ 0.55
SNX6Q9UNH7 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SNX6Q9UNH7 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SNX6Q9UNH7 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
SNX6Q9UNH7 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
SNX6Q9UNH7 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SNX6Q9UNH7 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SNX6Q9UNH7 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SNX6Q9UNH7 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SNX6Q9UNH7 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SNX6Q9UNH7 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC18.46■□□□□ 0.55
SNX6Q9UNH7 AC026471.1-201ENST00000564629 3026 ntBASIC18.46■□□□□ 0.55
SNX6Q9UNH7 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
SNX6Q9UNH7 AC020763.4-201ENST00000623414 4170 ntBASIC18.46■□□□□ 0.55
SNX6Q9UNH7 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SNX6Q9UNH7 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SNX6Q9UNH7 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
SNX6Q9UNH7 AC239809.2-201ENST00000415381 517 ntBASIC18.46■□□□□ 0.55
SNX6Q9UNH7 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.46■□□□□ 0.55
SNX6Q9UNH7 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.46■□□□□ 0.55
SNX6Q9UNH7 TSPY21P-201ENST00000433481 731 ntBASIC18.46■□□□□ 0.55
SNX6Q9UNH7 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.46■□□□□ 0.55
SNX6Q9UNH7 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC18.46■□□□□ 0.55
SNX6Q9UNH7 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
SNX6Q9UNH7 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SNX6Q9UNH7 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
SNX6Q9UNH7 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SNX6Q9UNH7 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms