Protein–RNA interactions for Protein: Q9ULS5

TMCC3, Transmembrane and coiled-coil domain protein 3, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMCC3Q9ULS5 RER1-204ENST00000378518 522 ntTSL 3 BASIC17.72■□□□□ 0.43
TMCC3Q9ULS5 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TMCC3Q9ULS5 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TMCC3Q9ULS5 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC17.72■□□□□ 0.43
TMCC3Q9ULS5 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TMCC3Q9ULS5 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TMCC3Q9ULS5 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TMCC3Q9ULS5 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
TMCC3Q9ULS5 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TMCC3Q9ULS5 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
TMCC3Q9ULS5 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TMCC3Q9ULS5 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.72■□□□□ 0.43
TMCC3Q9ULS5 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TMCC3Q9ULS5 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TMCC3Q9ULS5 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TMCC3Q9ULS5 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.72■□□□□ 0.43
TMCC3Q9ULS5 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TMCC3Q9ULS5 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.71■□□□□ 0.43
TMCC3Q9ULS5 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
TMCC3Q9ULS5 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TMCC3Q9ULS5 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.71■□□□□ 0.43
TMCC3Q9ULS5 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
TMCC3Q9ULS5 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
TMCC3Q9ULS5 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
TMCC3Q9ULS5 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TMCC3Q9ULS5 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TMCC3Q9ULS5 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TMCC3Q9ULS5 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TMCC3Q9ULS5 MFF-205ENST00000354503 1085 ntTSL 2 BASIC17.71■□□□□ 0.43
TMCC3Q9ULS5 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TMCC3Q9ULS5 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TMCC3Q9ULS5 AC073210.2-201ENST00000430369 194 ntBASIC17.71■□□□□ 0.43
TMCC3Q9ULS5 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.71■□□□□ 0.43
TMCC3Q9ULS5 AC133552.2-202ENST00000575694 574 ntBASIC17.71■□□□□ 0.43
TMCC3Q9ULS5 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC17.71■□□□□ 0.43
TMCC3Q9ULS5 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
TMCC3Q9ULS5 AC092666.2-201ENST00000613287 246 ntBASIC17.71■□□□□ 0.43
TMCC3Q9ULS5 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC17.71■□□□□ 0.43
TMCC3Q9ULS5 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TMCC3Q9ULS5 AC104581.1-202ENST00000635932 2618 ntBASIC17.71■□□□□ 0.43
TMCC3Q9ULS5 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TMCC3Q9ULS5 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.71■□□□□ 0.43
TMCC3Q9ULS5 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.71■□□□□ 0.43
TMCC3Q9ULS5 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC17.71■□□□□ 0.43
TMCC3Q9ULS5 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TMCC3Q9ULS5 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
TMCC3Q9ULS5 AL031598.1-201ENST00000561511 1773 ntBASIC17.71■□□□□ 0.43
TMCC3Q9ULS5 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.71■□□□□ 0.43
TMCC3Q9ULS5 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.71■□□□□ 0.42
TMCC3Q9ULS5 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
TMCC3Q9ULS5 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TMCC3Q9ULS5 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TMCC3Q9ULS5 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TMCC3Q9ULS5 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TMCC3Q9ULS5 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TMCC3Q9ULS5 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.7■□□□□ 0.42
TMCC3Q9ULS5 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TMCC3Q9ULS5 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TMCC3Q9ULS5 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TMCC3Q9ULS5 FP475955.4-201ENST00000623131 1990 ntBASIC17.7■□□□□ 0.42
TMCC3Q9ULS5 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
TMCC3Q9ULS5 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC17.7■□□□□ 0.42
TMCC3Q9ULS5 GGT1-206ENST00000404223 952 ntTSL 2 BASIC17.7■□□□□ 0.42
TMCC3Q9ULS5 HES2-206ENST00000489730 730 ntTSL 2 BASIC17.7■□□□□ 0.42
TMCC3Q9ULS5 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC17.7■□□□□ 0.42
TMCC3Q9ULS5 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC17.7■□□□□ 0.42
TMCC3Q9ULS5 AC005829.2-201ENST00000571422 1056 ntBASIC17.7■□□□□ 0.42
TMCC3Q9ULS5 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TMCC3Q9ULS5 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TMCC3Q9ULS5 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TMCC3Q9ULS5 MKRN4P-201ENST00000444706 1521 ntBASIC17.7■□□□□ 0.42
TMCC3Q9ULS5 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TMCC3Q9ULS5 AC104417.2-201ENST00000562989 1793 ntBASIC17.7■□□□□ 0.42
TMCC3Q9ULS5 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
TMCC3Q9ULS5 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TMCC3Q9ULS5 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TMCC3Q9ULS5 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TMCC3Q9ULS5 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TMCC3Q9ULS5 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TMCC3Q9ULS5 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.7■□□□□ 0.42
TMCC3Q9ULS5 AC093525.10-201ENST00000625130 1569 ntBASIC17.7■□□□□ 0.42
TMCC3Q9ULS5 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC17.7■□□□□ 0.42
TMCC3Q9ULS5 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TMCC3Q9ULS5 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
TMCC3Q9ULS5 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
TMCC3Q9ULS5 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
TMCC3Q9ULS5 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TMCC3Q9ULS5 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.69■□□□□ 0.42
TMCC3Q9ULS5 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TMCC3Q9ULS5 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
TMCC3Q9ULS5 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.69■□□□□ 0.42
TMCC3Q9ULS5 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TMCC3Q9ULS5 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
TMCC3Q9ULS5 AC090164.3-201ENST00000610780 2143 ntBASIC17.69■□□□□ 0.42
TMCC3Q9ULS5 WIZP1-201ENST00000531444 2299 ntBASIC17.69■□□□□ 0.42
TMCC3Q9ULS5 AC009113.1-201ENST00000570267 2443 ntBASIC17.69■□□□□ 0.42
TMCC3Q9ULS5 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
TMCC3Q9ULS5 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TMCC3Q9ULS5 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.69■□□□□ 0.42
TMCC3Q9ULS5 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms